RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 KRT85P78386 507 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 SMAD3P84022 425 aaKnown RBP8.55□□□□□ -1.04
CPSF4-202ENST00000412686 MBTD1Q05BQ5 628 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 ARSHQ5FYA8 562 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 IER5LQ5T953 404 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 CATSPER4Q7RTX7 472 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 CDR2LQ86X02 465 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-202ENST00000412686 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 LEO1Q8WVC0 666 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-202ENST00000412686 RAD54LQ92698 747 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 STAMQ92783 540 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 TOP1MTQ969P6 601 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 TTYH1Q9H313 450 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-202ENST00000412686 RCOR1Q9UKL0 485 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 MYH11P35749 1972 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 KIAA1671Q9BY89 1806 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 TTC3P53804 2025 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 DENND3A2RUS2 1198 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 C9IYK1 514 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 ASAP2O43150 1006 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 B4GALT5O43286 388 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 TLL1O43897 1013 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 TSPAN1O60635 241 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 EFCAB14O75071 495 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 GJB5O95377 273 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 LIG1P18858 919 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 SFPQP23246 707 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 TXLNAP40222 546 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 STAT6P42226 847 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 PHKA2P46019 1235 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 PEX3P56589 373 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 NUCB2P80303 420 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 TFDP1Q14186 410 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 MXD4Q14582 209 aaPredicted RBP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 AMHR2Q16671 573 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 RRAGBQ5VZM2 374 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 ATL3Q6DD88 541 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 SRGAP1Q7Z6B7 1085 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 GPBP1Q86WP2 473 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 PHOSPHO2Q8TCD6 241 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 KCNG4Q8TDN1 519 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 LARP4BQ92615 738 aaKnown RBP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 DHX58Q96C10 678 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 CPB2Q96IY4 423 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 SPATA32Q96LK8 384 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 REEP2Q9BRK0 252 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 FTHL17Q9BXU8 183 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 CERS4Q9HA82 394 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 RGS18Q9NS28 235 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 AGPAT5Q9NUQ2 364 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 CFAP45Q9UL16 551 aa8.54□□□□□ -1.04
CPSF4-202ENST00000412686 PIN4Q9Y237 131 aaKnown RBP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
CPSF4-202ENST00000412686 FNDC1Q4ZHG4 1894 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 COL4A4P53420 1690 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 MYMKA6NI61 221 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 CCDC169A6NNP5 214 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 MEIS3P2A8K0S8 358 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 SLC26A4O43511 780 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 FGFR1P11362 822 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 ATF7P17544 494 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 ARF4P18085 180 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 GUCY2CP25092 1073 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 HOXA11P31270 313 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 NAMPTP43490 491 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 NPTX2P47972 431 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 HTRA4P83105 476 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 CDC42EP1Q00587 391 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 GIT2Q14161 759 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 E2F4Q16254 413 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 UBXN11Q5T124 520 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 RESP18Q5W5W9 173 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 CDCA2Q69YH5 1023 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 TWF2Q6IBS0 349 aaKnown RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 CCDC73Q6ZRK6 1079 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 DYMQ7RTS9 669 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 ZNF710Q8N1W2 664 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 RNF169Q8NCN4 708 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 DEPTORQ8TB45 409 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 LPPQ93052 612 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
CPSF4-202ENST00000412686 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 PCDHA11Q9Y5I1 949 aa8.53□□□□□ -1.04
CPSF4-202ENST00000412686 NLRC5Q86WI3 1866 aa8.52□□□□□ -1.05
CPSF4-202ENST00000412686 A0A1B0GVL5 298 aa8.52□□□□□ -1.05
CPSF4-202ENST00000412686 EPOPA6NHQ4 379 aa8.52□□□□□ -1.05
CPSF4-202ENST00000412686 RFXAPO00287 272 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms