RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 SIGLEC10Q96LC7 697 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 EPB41L4AQ9HCS5 686 aaPredicted RBP6.59□□□□□ -1.35
LSM5-206ENST00000409987 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 SPATA6Q9NWH7 488 aaPredicted RBP6.59□□□□□ -1.35
LSM5-206ENST00000409987 SAE1Q9UBE0 346 aaPredicted RBP6.59□□□□□ -1.35
LSM5-206ENST00000409987 Q9UFV3 132 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 DNAI1Q9UI46 699 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 CDC42EP3Q9UKI2 254 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 AP1G1O43747 822 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 NRP2O60462 931 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 CAND2O75155 1236 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 OFD1O75665 1012 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 CYP7B1O75881 506 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 ZNF28P17035 718 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 EDNRBP24530 442 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 IL13P35225 146 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 RHBDL3P58872 404 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 DLX2Q07687 328 aaPredicted RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 MGAT5Q09328 741 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 SSPNQ14714 243 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 MAP9Q49MG5 647 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 ATAT1Q5SQI0 421 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 FAM129CQ86XR2 697 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 GLB1L2Q8IW92 636 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 GLB1L3Q8NCI6 653 aaPredicted RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 SLC35G2Q8TBE7 412 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 NRG4Q8WWG1 115 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 NKD2Q969F2 451 aaPredicted RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 HPS3Q969F9 1004 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 TAAR9Q96RI9 348 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 DDX20Q9UHI6 824 aaKnown RBP6.58□□□□□ -1.36
LSM5-206ENST00000409987 FBXO10Q9UK96 956 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 IRAK3Q9Y616 596 aa6.58□□□□□ -1.36
LSM5-206ENST00000409987 ERC2O15083 957 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 HTRA2O43464 458 aaPredicted RBP6.57□□□□□ -1.36
LSM5-206ENST00000409987 TMEM127O75204 238 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 KLHL18O94889 574 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 XPAP23025 273 aaPredicted RBP6.57□□□□□ -1.36
LSM5-206ENST00000409987 WASP42768 502 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 MCAMP43121 646 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 STAT5BP51692 787 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 SLC16A1P53985 500 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 NRG3P56975 720 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 PPP3CAQ08209 521 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 MESP2Q0VG99 397 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 TOP3AQ13472 1001 aaPredicted RBP6.57□□□□□ -1.36
LSM5-206ENST00000409987 GRM3Q14832 879 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 EIF4HQ15056 248 aaKnown RBP6.57□□□□□ -1.36
LSM5-206ENST00000409987 MUM1L1Q5H9M0 696 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 TIFAQ96CG3 184 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 GREM2Q9H772 168 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 IPPQ9Y573 584 aa6.57□□□□□ -1.36
LSM5-206ENST00000409987 A0A1W2PR48 441 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM5-206ENST00000409987 PDCP20941 246 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 GLDCP23378 1020 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
LSM5-206ENST00000409987 POLD1P28340 1107 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 KCNQ1P51787 676 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 CD69Q07108 199 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 HLTFQ14527 1009 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM5-206ENST00000409987 GBX1Q14549 363 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 VWA3BQ502W6 1294 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 ARHGAP29Q52LW3 1261 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 SLC4A10Q6U841 1118 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 SYDE1Q6ZW31 735 aaPredicted RBP6.56□□□□□ -1.36
LSM5-206ENST00000409987 PRR18Q8N4B5 295 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 DIS3LQ8TF46 1054 aaKnown RBP6.56□□□□□ -1.36
LSM5-206ENST00000409987 WDR92Q96MX6 357 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 ARNT2Q9HBZ2 717 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 PRDM11Q9NQV5 511 aa6.56□□□□□ -1.36
LSM5-206ENST00000409987 LY86O95711 162 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 KRT1P04264 644 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 MED14OSP0DP75 135 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 PI3P19957 117 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 BIRC2Q13490 618 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 GALEQ14376 348 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 CNKSR3Q6P9H4 555 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 USP45Q70EL2 814 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 SAPCD2Q86UD0 394 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 OR2I1PQ8NGU4 316 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 RIN2Q8WYP3 895 aaPredicted RBP6.55□□□□□ -1.36
LSM5-206ENST00000409987 DPF2Q92785 391 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 MVB12AQ96EY5 273 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 PWWP2AQ96N64 755 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 ADI1Q9BV57 179 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 SAP30BPQ9UHR5 308 aaKnown RBP6.55□□□□□ -1.36
LSM5-206ENST00000409987 RCAN3Q9UKA8 241 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms