RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TUBB4BP68371 445 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 MEI1Q5TIA1 1274 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 HDXQ7Z353 690 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 GLYCTKQ8IVS8 523 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 C4orf19Q8IY42 314 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 RPGRIP1Q96KN7 1286 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 IGSF9BQ9UPX0 1349 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 ANKRD63C9JTQ0 380 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 KCNA2P16389 499 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 SOX5P35711 763 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 GCLMP48507 274 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 KAT5Q92993 513 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 HSPBP1Q9NZL4 362 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 PFASO15067 1338 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 ADGRA3Q8IWK6 1321 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 ADSSP30520 456 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 PPP2R5AQ15172 486 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 MMGT1Q8N4V1 131 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 SAAL1Q96ER3 474 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 GABBR1Q9UBS5 961 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 APEX2Q9UBZ4 518 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 TCEAL9Q9UHQ7 104 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 LCMT1Q9UIC8 334 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 TARSL2A2RTX5 802 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 CCND2P30279 289 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 JAK3P52333 1124 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 GTF2BQ00403 316 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 KRT76Q01546 638 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 LRRC57Q8N9N7 239 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 ACCSQ96QU6 501 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 SYT11Q9BT88 431 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 MOV10L1Q9BXT6 1211 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 TAS2R14Q9NYV8 317 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
SCAMP4-202ENST00000409472 ZSCAN5CA6NGD5 496 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 STBD1O95210 358 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 STAT1P42224 750 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 MAGEA9P43362 315 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC60Q8IWA6 550 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 STK33Q9BYT3 514 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 BZW2Q9Y6E2 419 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 PTPRFP10586 1907 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 NPTX2P47972 431 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 NLRX1Q86UT6 975 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 SLC30A5Q8TAD4 765 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 SLC20A1Q8WUM9 679 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 OSGEPQ9NPF4 335 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
SCAMP4-202ENST00000409472 ZC3H4Q9UPT8 1303 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 OTOFQ9HC10 1997 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 FOXN3O00409 490 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 FERP16591 822 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 VAMP7P51809 220 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 SP2Q02086 613 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 SLC39A4Q6P5W5 647 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 TMEM206Q9H813 350 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 ACP6Q9NPH0 428 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 PCDHA10Q9Y5I2 948 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 SFNP31947 248 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 GALCP54803 685 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 SWSAP1Q6NVH7 229 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 CCNI2Q6ZMN8 369 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 XXYLT1Q8NBI6 393 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 TPCN2Q8NHX9 752 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
SCAMP4-202ENST00000409472 ZBTB48P10074 688 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 ABCB4P21439 1286 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms