RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HSD17B3P37058 310 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 COBLL1Q53SF7 1204 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 SNRNP48Q6IEG0 339 aaKnown RBP14.46□□□□□ -0.09
COL6A2-204ENST00000409416 GABBR1Q9UBS5 961 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 RNF14Q9UBS8 474 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 LAMB1P07942 1786 aa14.46□□□□□ -0.09
COL6A2-204ENST00000409416 MYO1FO00160 1098 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 ATP9AO75110 1047 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 CXCL9Q07325 125 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 ARHGAP27Q6ZUM4 889 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 NCAPG2Q86XI2 1143 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 CBWD2Q8IUF1 395 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 ATP6V1G3Q96LB4 118 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 GDF3Q9NR23 364 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 PICK1Q9NRD5 415 aa14.46□□□□□ -0.1
COL6A2-204ENST00000409416 LARSQ9P2J5 1176 aaKnown RBP14.46□□□□□ -0.1
COL6A2-204ENST00000409416 SLITRK3O94933 977 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 SLC12A3P55017 1021 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 PPP1R7Q15435 360 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 ANKRD35Q8N283 1001 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 DCAF4Q8WV16 495 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 THAP2Q9H0W7 228 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 AMFRQ9UKV5 643 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 GOLGA6L7A0A1B0GV03 622 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 PIAS1O75925 651 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 NT5C2P49902 561 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 PRELPP51888 382 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 ITIH3Q06033 890 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 SLC20A2Q08357 652 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 SPOPLQ6IQ16 392 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 IRF2BP2Q7Z5L9 587 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 WHAMMQ8TF30 809 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 FNBP1Q96RU3 617 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 RPAP3Q9H6T3 665 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-204ENST00000409416 UTP11Q9Y3A2 253 aaKnown RBP14.45□□□□□ -0.1
COL6A2-204ENST00000409416 PCDHGC5Q9Y5F6 944 aa14.45□□□□□ -0.1
COL6A2-204ENST00000409416 DLEC1Q9Y238 1755 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 IFNB1P01574 187 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 GADL1Q6ZQY3 521 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 ANKRD42Q8N9B4 389 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 LMBR1Q8WVP7 490 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 SH3GL2Q99962 352 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 NEUROG2Q9H2A3 272 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 AIPL1Q9NZN9 384 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 MYH1P12882 1939 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 RPA1P27694 616 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 USP11P51784 963 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 DYNLT1P63172 113 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 TPCN2Q8NHX9 752 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 LRRC45Q96CN5 670 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 KCNK9Q9NPC2 374 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 DENND3A2RUS2 1198 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 FOXO6A8MYZ6 492 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 SHOX2O60902 331 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 PPP1R37O75864 691 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 FTLP02792 175 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 CD19P15391 556 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 HOXA10P31260 410 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 RNF207Q6ZRF8 634 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 PRUNE1Q86TP1 453 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 MICALL2Q8IY33 904 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 IQCKQ8N0W5 287 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 CCDC26Q8TAB7 109 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 C1orf54Q8WWF1 131 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 SYN2Q92777 582 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 ZNF653Q96CK0 615 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 NACC1Q96RE7 527 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 LBHD1Q9BQE6 289 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-204ENST00000409416 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 ASIC3Q9UHC3 531 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 PCDHA2Q9Y5H9 948 aa14.44□□□□□ -0.1
COL6A2-204ENST00000409416 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 SNHG28P0DPA3 235 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 CLK2P49760 499 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 MAGOHP61326 146 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 SETQ01105 290 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 STXBP4Q6ZWJ1 553 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 NLRP14Q86W24 1093 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 ZNF473Q8WTR7 871 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 MAGOHBQ96A72 148 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 CCT8L2Q96SF2 557 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 NAP1L4Q99733 375 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 GEMIN8Q9NWZ8 242 aaKnown RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 DDX3XO00571 662 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 FOSP01100 380 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 MARCKSL1P49006 195 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 MXI1P50539 228 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 COL16A1Q07092 1604 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-204ENST00000409416 EDRF1Q3B7T1 1238 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 HAUS6Q7Z4H7 955 aa14.43□□□□□ -0.1
COL6A2-204ENST00000409416 CPLX4Q7Z7G2 160 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms