RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MAPK13O15264 365 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 PLCG2P16885 1265 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 AP1B1Q10567 949 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 TROAPQ12815 778 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 CBX3Q13185 183 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 TTC5Q8N0Z6 440 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 GRAMD1AQ96CP6 724 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 RNF41Q9H4P4 317 aaPredicted RBP13.74□□□□□ -0.21
HERC3-203ENST00000407637 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 FUT4P22083 530 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 CDK7P50613 346 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 RASSF2P50749 326 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 LMNB2Q03252 620 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 DHX34Q14147 1143 aaKnown RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 GSTA3Q16772 222 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 SPATA24Q86W54 205 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
HERC3-203ENST00000407637 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 GANQ9H2C0 597 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 AMFRQ9UKV5 643 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 RARGP13631 454 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 PTPN4P29074 926 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 CDR2Q01850 454 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 DNAJC3Q13217 504 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 INF2Q27J81 1249 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 STKLD1Q8NE28 680 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 NAT14Q8WUY8 206 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 LZTS2Q9BRK4 669 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 LARSQ9P2J5 1176 aaKnown RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
HERC3-203ENST00000407637 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
HERC3-203ENST00000407637 A0A0J9YVX5 310 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 DDX3YO15523 660 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 PSMG1O95456 288 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 ACTN1P12814 892 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 PTGIRP43119 386 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 TAF1BQ53T94 588 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 SYCE1Q8N0S2 351 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 GUF1Q8N442 669 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 SNRNP27Q8WVK2 155 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 NR1H4Q96RI1 486 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 CADM1Q9BY67 442 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 CDC42EP4Q9H3Q1 356 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 OSGEPQ9NPF4 335 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 TMEM221A6NGB7 291 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 DCTN3O75935 186 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
HERC3-203ENST00000407637 DRG2P55039 364 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 PLOD1Q02809 727 aaPredicted RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 STRN3Q13033 797 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 DUS1LQ6P1R4 473 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 ARHGEF18Q6ZSZ5 1173 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 MARK2Q7KZI7 788 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 MIGA1Q8NAN2 632 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 DNAJC1Q96KC8 554 aaKnown RBP13.72□□□□□ -0.21
HERC3-203ENST00000407637 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 TSG101Q99816 390 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 TLE6Q9H808 572 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 SLCO1B3Q9NPD5 702 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 TCP11L1Q9NUJ3 509 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
HERC3-203ENST00000407637 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 MYMKA6NI61 221 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.21
HERC3-203ENST00000407637 GFPT2O94808 682 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 SERPINB3P29508 390 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 HPCAP84074 193 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 AMPD3Q01432 767 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 MOGSQ13724 837 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms