RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 SPC25Q9HBM1 224 aa20.09■□□□□ 0.81
MBD1-208ENST00000398493 METTL14Q9HCE5 456 aaKnown RBP20.09■□□□□ 0.81
MBD1-208ENST00000398493 AGPAT5Q9NUQ2 364 aa20.09■□□□□ 0.81
MBD1-208ENST00000398493 PCDHB13Q9Y5F0 798 aa20.09■□□□□ 0.81
MBD1-208ENST00000398493 NDUFA10O95299 355 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.8
MBD1-208ENST00000398493 SLU7O95391 586 aaKnown RBP20.08■□□□□ 0.8
MBD1-208ENST00000398493 HOXD8P13378 290 aaPredicted RBP20.08■□□□□ 0.8
MBD1-208ENST00000398493 CST5P28325 142 aaPredicted RBP20.08■□□□□ 0.8
MBD1-208ENST00000398493 KLK7P49862 253 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 CPT1AP50416 773 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 ZNF131P52739 623 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 RNF180Q86T96 592 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 TRIM50Q86XT4 487 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 TNS4Q8IZW8 715 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 CCDC43Q96MW1 224 aaKnown RBP20.08■□□□□ 0.8
MBD1-208ENST00000398493 CHP1Q99653 195 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 L2HGDHQ9H9P8 463 aa20.08■□□□□ 0.8
MBD1-208ENST00000398493 SFI1A8K8P3 1242 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 WDR64B1ANS9 1081 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 ZBTB39O15060 712 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 PPFIA4O75335 1185 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 ASGR1P07306 291 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 ZNF286BP0CG31 522 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 UTP14CQ5TAP6 766 aaKnown RBP20.07■□□□□ 0.8
MBD1-208ENST00000398493 CCDC60Q8IWA6 550 aaPredicted RBP20.07■□□□□ 0.8
MBD1-208ENST00000398493 FAM178BQ8IXR5 827 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 NUCKS1Q9H1E3 243 aaKnown RBP20.07■□□□□ 0.8
MBD1-208ENST00000398493 LZTFL1Q9NQ48 299 aa20.07■□□□□ 0.8
MBD1-208ENST00000398493 WRAP73Q9P2S5 460 aaPredicted RBP20.07■□□□□ 0.8
MBD1-208ENST00000398493 IGKV6D-21A0A0A0MT36 114 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 SLC16A3O15427 465 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 MYL3P08590 195 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 EN2P19622 333 aaPredicted RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 PSMC5P62195 406 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 PURAQ00577 322 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 DGKDQ16760 1214 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 PADI6Q6TGC4 694 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 CXCL17Q6UXB2 119 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 SMAP1Q8IYB5 467 aaPredicted RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 PPP1R13LQ8WUF5 828 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 KAT2BQ92831 832 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 C16orf70Q9BSU1 422 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 TIPINQ9BVW5 301 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 ARMCX3Q9UH62 379 aaPredicted RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 PCDHA10Q9Y5I2 948 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 DKC1O60832 514 aaKnown RBP eCLIP20.06■□□□□ 0.8
MBD1-208ENST00000398493 URI1O94763 535 aaPredicted RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 LGALS2P05162 132 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 EPB41P11171 864 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 HNRNPH3P31942 346 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 NFIL3Q16649 462 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 UGCGQ16739 394 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 ODR4Q5SWX8 454 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 WDR59Q6PJI9 974 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 ZNF720Q7Z2F6 126 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 CACNA2D4Q7Z3S7 1137 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 C4orf19Q8IY42 314 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 ARRDC4Q8NCT1 418 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 DIS3LQ8TF46 1054 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 FAM207AQ9NSI2 230 aaPredicted RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 LARSQ9P2J5 1176 aaKnown RBP20.06■□□□□ 0.8
MBD1-208ENST00000398493 MYO1AQ9UBC5 1043 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 FRMPD3Q5JV73 1810 aa20.06■□□□□ 0.8
MBD1-208ENST00000398493 NR3C1P04150 777 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
MBD1-208ENST00000398493 ALCAMQ13740 583 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 MIS18BP1Q6P0N0 1132 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 ACRBPQ8NEB7 543 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 GOLGA5Q8TBA6 731 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 PLAGL2Q9UPG8 496 aa20.05■□□□□ 0.8
MBD1-208ENST00000398493 DNM1LO00429 736 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 LGR5O75473 907 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 MAPTP10636 758 aaKnown RBP20.04■□□□□ 0.8
MBD1-208ENST00000398493 ATP4AP20648 1035 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 NMT1P30419 496 aaKnown RBP20.04■□□□□ 0.8
MBD1-208ENST00000398493 HOXD13P35453 343 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 ACLYP53396 1101 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 HS2ST1Q7LGA3 356 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 GABBR1Q9UBS5 961 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 HIP1RO75146 1068 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 PSAPP07602 524 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 KCNH2Q12809 1159 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 GLIPR1L2Q4G1C9 344 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 BRDTQ58F21 947 aaPredicted RBP20.04■□□□□ 0.8
MBD1-208ENST00000398493 CCDC42Q96M95 316 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 HAUS4Q9H6D7 363 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 NHEJ1Q9H9Q4 299 aaPredicted RBP20.04■□□□□ 0.8
MBD1-208ENST00000398493 POLD4Q9HCU8 107 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 ANKEF1Q9NU02 776 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 CEP72Q9P209 647 aa20.04■□□□□ 0.8
MBD1-208ENST00000398493 EIF3CLB5ME19 914 aaKnown RBP20.03■□□□□ 0.8
MBD1-208ENST00000398493 BACH1O14867 736 aa20.03■□□□□ 0.8
MBD1-208ENST00000398493 YWHABP31946 246 aaKnown RBP20.03■□□□□ 0.8
MBD1-208ENST00000398493 RARRES1P49788 294 aa20.03■□□□□ 0.8
MBD1-208ENST00000398493 STAT5BP51692 787 aa20.03■□□□□ 0.8
MBD1-208ENST00000398493 TRMT1LQ7Z2T5 733 aaKnown RBP20.03■□□□□ 0.8
MBD1-208ENST00000398493 PCSK9Q8NBP7 692 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms