RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GLB1LQ6UWU2 654 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 ZNF598Q86UK7 904 aaKnown RBP15.3■□□□□ 0.04
CXCL12-205ENST00000395794 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-205ENST00000395794 PIGOQ8TEQ8 1089 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 NACC1Q96RE7 527 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 CWH43Q9H720 699 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 TLE6Q9H808 572 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 TLR9Q9NR96 1032 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 AGPAT5Q9NUQ2 364 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 FAM105AQ9NUU6 356 aa15.3■□□□□ 0.04
CXCL12-205ENST00000395794 SPTBN5Q9NRC6 3674 aaKnown RBP15.3■□□□□ 0.04
CXCL12-205ENST00000395794 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
CXCL12-205ENST00000395794 CAMK1Q14012 370 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
CXCL12-205ENST00000395794 COL19A1Q14993 1142 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 CLLU1OSQ5K130 101 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 KCNT2Q6UVM3 1135 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 SPG21Q9NZD8 308 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 LZTS1Q9Y250 596 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 WDR81Q562E7 1941 aa15.29■□□□□ 0.04
CXCL12-205ENST00000395794 GRXCR2A6NFK2 248 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 ZNF623O75123 536 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 U2AF2P26368 475 aaKnown RBP eCLIP15.28■□□□□ 0.04
CXCL12-205ENST00000395794 IRS1P35568 1242 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 NRIP1P48552 1158 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 RARRES1P49788 294 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 NDUFV1P49821 464 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
CXCL12-205ENST00000395794 CTC1Q2NKJ3 1217 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 MCTP1Q6DN14 999 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
CXCL12-205ENST00000395794 CATSPER3Q86XQ3 398 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 MCPH1Q8NEM0 835 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
CXCL12-205ENST00000395794 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-205ENST00000395794 ENTPD7Q9NQZ7 604 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 HCSTQ9UBK5 93 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
CXCL12-205ENST00000395794 H3BQV1 296 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 USO1O60763 962 aaKnown RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 ATF7P17544 494 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 RPA1P27694 616 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 AXLP30530 894 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 SSTR3P32745 418 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 PTENP60484 403 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 POU5F1BQ06416 359 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 ADAM15Q13444 863 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 NOMO2Q5JPE7 1267 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 EFHBQ8N7U6 833 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 CNNM3Q8NE01 707 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 LPPQ93052 612 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 TMX3Q96JJ7 454 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 NGRNQ9NPE2 291 aaKnown RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 XPNPEP1Q9NQW7 623 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
CXCL12-205ENST00000395794 INPP5FQ9Y2H2 1132 aa15.27■□□□□ 0.04
CXCL12-205ENST00000395794 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 A0A087WWV3 80 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 MED24O75448 989 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 ARL2P36404 184 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 CCT6AP40227 531 aaKnown RBP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 BCAR1P56945 870 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 CLUL1Q15846 466 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 MAEAQ7L5Y9 396 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 ADGRD2Q7Z7M1 963 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 HACE1Q8IYU2 909 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 CCDC51Q96ER9 411 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 TMEM169Q96HH4 297 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 FAM193BQ96PV7 902 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 CDCA3Q99618 268 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 TCF25Q9BQ70 676 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 TRIM6Q9C030 488 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 CD207Q9UJ71 328 aa15.26■□□□□ 0.03
CXCL12-205ENST00000395794 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-205ENST00000395794 LAD1O00515 517 aa15.25■□□□□ 0.03
CXCL12-205ENST00000395794 LINC01565O15544 149 aa15.25■□□□□ 0.03
CXCL12-205ENST00000395794 ZC3H11AO75152 810 aaKnown RBP eCLIP15.25■□□□□ 0.03
CXCL12-205ENST00000395794 OFD1O75665 1012 aa15.25■□□□□ 0.03
CXCL12-205ENST00000395794 IL9P15248 144 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms