RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HIP1RO75146 1068 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 HOXA10P31260 410 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 GABPAQ06546 454 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 CUL1Q13616 776 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 TAF11Q15544 211 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 SGO2Q562F6 1265 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 SYDE2Q5VT97 1194 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 LMBRD2Q68DH5 695 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 KDM7AQ6ZMT4 941 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 LARGE2Q8N3Y3 721 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 ATG4AQ8WYN0 398 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 ETNK1Q9HBU6 452 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 ECM29Q5VYK3 1845 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 CCDC160A6NGH7 325 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 TLR2O60603 784 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 MYL7Q01449 175 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 KYNUQ16719 465 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 OGFOD1Q8N543 542 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 RNF14Q9UBS8 474 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 GOLGA8RI6L899 631 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 COG2Q14746 738 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 CCDC137Q6PK04 289 aaKnown RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 CNOT8Q9UFF9 292 aaKnown RBP14.23□□□□□ -0.13
NFKB1-202ENST00000394820 DOCK2Q92608 1830 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
NFKB1-202ENST00000394820 SUN1O94901 812 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 SARNPP82979 210 aaKnown RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 HHATQ5VTY9 493 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 PWWP2AQ96N64 755 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 TRIM6Q9C030 488 aaPredicted RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 FAM198AQ9UFP1 575 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 BRAFP15056 766 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 SLC8A1P32418 973 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 KNOP1Q1ED39 458 aaKnown RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 PODNQ7Z5L7 613 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 CATSPER3Q86XQ3 398 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 IFT74Q96LB3 600 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 KLF6Q99612 283 aaPredicted RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 TMBIM4Q9HC24 238 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 TRIM33Q9UPN9 1127 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 LGR5O75473 907 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 AKAP3O75969 853 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 NAIF1Q69YI7 327 aaPredicted RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 STXBP4Q6ZWJ1 553 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 SGSM3Q96HU1 749 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 ZNF277Q9NRM2 450 aaPredicted RBP14.22□□□□□ -0.13
NFKB1-202ENST00000394820 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
NFKB1-202ENST00000394820 BCORQ6W2J9 1755 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 ESYT2A0FGR8 921 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 SCFD1Q8WVM8 642 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 STMN4Q9H169 189 aaPredicted RBP14.21□□□□□ -0.13
NFKB1-202ENST00000394820 ISCUQ9H1K1 167 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
NFKB1-202ENST00000394820 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 DNM1LO00429 736 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 CLDN3O15551 220 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 BAG2O95816 211 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 BCRP11274 1271 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 PDIA5Q14554 519 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 C15orf52Q6ZUT6 534 aaKnown RBP14.21□□□□□ -0.13
NFKB1-202ENST00000394820 CDAN1Q8IWY9 1227 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 BAP1Q92560 729 aa14.21□□□□□ -0.13
NFKB1-202ENST00000394820 ACTR5Q9H9F9 607 aaPredicted RBP14.21□□□□□ -0.13
NFKB1-202ENST00000394820 FERP16591 822 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 PSMC2P35998 433 aaKnown RBP14.21□□□□□ -0.14
NFKB1-202ENST00000394820 CETN2P41208 172 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 USP11P51784 963 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 JAG1P78504 1218 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 DLGAP5Q15398 846 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 ZNF394Q53GI3 561 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 SH3BP5LQ7L8J4 393 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 LONP2Q86WA8 852 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 TRIM7Q9C029 511 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 IKBKGQ9Y6K9 419 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 GRIN2DO15399 1336 aa14.21□□□□□ -0.14
NFKB1-202ENST00000394820 FAM86B1E9PN63 330 aa14.2□□□□□ -0.14
NFKB1-202ENST00000394820 PI4K2BG5E9Z4 385 aa14.2□□□□□ -0.14
NFKB1-202ENST00000394820 IGF2BP3O00425 579 aaKnown RBP eCLIP14.2□□□□□ -0.14
NFKB1-202ENST00000394820 UBOX5O94941 541 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms