RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CASP8Q14790 479 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 SUPT20HL1Q3ZLR7 823 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 PHLDB3Q6NSJ2 640 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 RDH13Q8NBN7 331 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 NLGN2Q8NFZ4 835 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 PSMB7Q99436 277 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 PDLIM7Q9NR12 457 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
TDP1-202ENST00000393452 TMOD4Q9NZQ9 345 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 PAPPA2Q9BXP8 1791 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 EMSYQ7Z589 1322 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 CES2O00748 559 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 DKC1O60832 514 aaKnown RBP eCLIP9.83□□□□□ -0.84
TDP1-202ENST00000393452 FTCDO95954 541 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 NPTX2P47972 431 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 IFI16Q16666 785 aaKnown RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 MAP9Q49MG5 647 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 EPC2Q52LR7 807 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 CCNI2Q6ZMN8 369 aaPredicted RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 OTUD6AQ7L8S5 288 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 MAP4K3Q8IVH8 894 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 LNX1Q8TBB1 728 aaPredicted RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 ATP6V0A1Q93050 837 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 PCIF1Q9H4Z3 704 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 TBX20Q9UMR3 447 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 EXOC7Q9UPT5 735 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 SPATA31C2B4DYI2 1134 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 USP2O75604 605 aaPredicted RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 H2AFZP0C0S5 128 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 CCDC172P0C7W6 258 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 LMNB1P20700 586 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 OAS2P29728 719 aaKnown RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 ADSSP30520 456 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 SMTNP53814 917 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 RTP1P59025 263 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 DMP1Q13316 513 aaPredicted RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 KIF22Q14807 665 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 FAM102BQ5T8I3 360 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 CCDC181Q5TID7 509 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 CCDC70Q6NSX1 233 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 H2AFVQ71UI9 128 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 SLFN11Q7Z7L1 901 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 TPCN2Q8NHX9 752 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 KIFAP3Q92845 792 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 VTI1AQ96AJ9 217 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 VIPAS39Q9H9C1 493 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
TDP1-202ENST00000393452 SMARCAL1Q9NZC9 954 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 GABBR1Q9UBS5 961 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 SLC9A2Q9UBY0 812 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 A0A0G2JMZ2 1700 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 PFASO15067 1338 aa9.83□□□□□ -0.84
TDP1-202ENST00000393452 PSAPP07602 524 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 ZBTB48P10074 688 aaPredicted RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 CETN1Q12798 172 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 ABHD15Q6UXT9 468 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 ZSWIM2Q8NEG5 633 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 BSNDQ8WZ55 320 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 FBXL18Q96ME1 805 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 LRRC1Q9BTT6 524 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 RBM12Q9NTZ6 932 aaKnown RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 EHD2Q9NZN4 543 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 LRRIQ3A6PVS8 624 aaPredicted RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 H3BQF6 201 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 EIF3JO75822 258 aaKnown RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 DGAT1O75907 488 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 ADRB2P07550 413 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 MYBL2P10244 700 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 CNGA1P29973 690 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 ICAM3P32942 547 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 ACTR2P61160 394 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 GNPTABQ3T906 1256 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 GLE1Q53GS7 698 aaKnown RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 SWSAP1Q6NVH7 229 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 CCDC60Q8IWA6 550 aaPredicted RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 MCPH1Q8NEM0 835 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 CHST13Q8NET6 341 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 DNERQ8NFT8 737 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 U2AF1L4Q8WU68 220 aaKnown RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 HDAC7Q8WUI4 952 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 KCNN1Q92952 543 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 MS4A14Q96JA4 679 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 CEP170P1Q96L14 293 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 TMEM117Q9H0C3 514 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 XPNPEP1Q9NQW7 623 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 PACSIN2Q9UNF0 486 aaPredicted RBP9.82□□□□□ -0.84
TDP1-202ENST00000393452 SNCAIPQ9Y6H5 919 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 NCANO14594 1321 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 IGSF9BQ9UPX0 1349 aa9.82□□□□□ -0.84
TDP1-202ENST00000393452 OTOFQ9HC10 1997 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 DENND3A2RUS2 1198 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 CCDC169A6NNP5 214 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 ANKRD63C9JTQ0 380 aa9.81□□□□□ -0.84
TDP1-202ENST00000393452 FOXN3O00409 490 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms