RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PNMA2Q9UL42 364 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 GON4LQ3T8J9 2241 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 A0A1B0GTH6 734 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 ESRRAP11474 423 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 ADORA2BP29275 332 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 PRELPP51888 382 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 NPEPPSP55786 919 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ERVK-24P63145 666 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 SATB1Q01826 763 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 MYO1EQ12965 1108 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TMEM179Q6ZVK1 233 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 LINC00116Q8NCU8 138 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 SLC35G2Q8TBE7 412 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ABTB1Q969K4 478 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 HVCN1Q96D96 273 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 RNPC3Q96LT9 517 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 HAUS2Q9NVX0 235 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TCP11X1B4DZS4 312 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 KLRC1P26715 233 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 HMGCS2P54868 508 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 GPC5P78333 572 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 EPM2AIP1Q7L775 607 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 WHAMMQ8TF30 809 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TTC1Q99614 292 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 SIK2Q9H0K1 926 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 LRRC4Q9HBW1 653 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 FLT1P17948 1338 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 CFAP69A5D8W1 941 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 ZWINTO95229 277 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 OATP04181 439 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 VEGFAP15692 232 aaPredicted RBP5.34□□□□□ -1.56
LTN1-202ENST00000389194 GALCP54803 685 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 PDIA2Q13087 525 aaKnown RBP5.34□□□□□ -1.56
LTN1-202ENST00000389194 ZNF568Q3ZCX4 644 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 NLRP14Q86W24 1093 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 ENGASEQ8NFI3 743 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 CYFIP2Q96F07 1278 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 RUNDC3BQ96NL0 473 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 SHCBP1LQ9BZQ2 653 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 RPF1Q9H9Y2 349 aaKnown RBP5.34□□□□□ -1.56
LTN1-202ENST00000389194 CAPN11Q9UMQ6 739 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 CFAP74Q9C0B2 1584 aa5.34□□□□□ -1.56
LTN1-202ENST00000389194 STK36Q9NRP7 1315 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 RAD51CO43502 376 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MYBL1P10243 752 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 PSMD2Q13200 908 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ALS2CLQ60I27 953 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 EMBQ6PCB8 327 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CEP128Q6ZU80 1094 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.33□□□□□ -1.56
LTN1-202ENST00000389194 ATP6V1E2Q96A05 226 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CHMP6Q96FZ7 201 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 OTUD5Q96G74 571 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 BPIFA3Q9BQP9 254 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 COA1Q9GZY4 146 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 DHX36Q9H2U1 1008 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 GPRC5CQ9NQ84 441 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 RNF146Q9NTX7 359 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 DAGLAQ9Y4D2 1042 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CSDE1O75534 798 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 MOCS2O96007 188 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 ZSCAN20P17040 1043 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 GNA15P30679 374 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 BAG6P46379 1132 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 RNASELQ05823 741 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 EN1Q05925 392 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 DBN1Q16643 649 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ZBTB41Q5SVQ8 909 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PDXDC1Q6P996 788 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MYCBPQ99417 103 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 FAM217BQ9NTX9 383 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 SNX12Q9UMY4 172 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 GMNCA6NCL1 334 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PPP1R3GB7ZBB8 358 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 SOX10P56693 466 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 YWHAEP62258 255 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 NOP14P78316 857 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MTMR2Q13614 643 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ZNF699Q32M78 642 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 FAM193BQ96PV7 902 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 TGS1Q96RS0 853 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 POP1Q99575 1024 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 LACRTQ9GZZ8 138 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PRDM5Q9NQX1 630 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 TRPC5Q9UL62 973 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 FZD1Q9UP38 647 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CEP170BQ9Y4F5 1589 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 PSAPP07602 524 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 KRT17Q04695 432 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CCDC93Q567U6 631 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PHLDB3Q6NSJ2 640 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CROCCP2Q86T23 111 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MAP7D3Q8IWC1 876 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 TMEM117Q9H0C3 514 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms