RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 NFKBIAP25963 317 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 DHX9Q08211 1270 aaKnown RBP21.07■□□□□ 0.96
PCDH8-202ENST00000377942 DPYDQ12882 1025 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 ANKRD40Q6AI12 368 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 ATP8A1Q9Y2Q0 1164 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 RPA1P27694 616 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 NMT1P30419 496 aaKnown RBP21.07■□□□□ 0.96
PCDH8-202ENST00000377942 GNA15P30679 374 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 SNRPFP62306 86 aaKnown RBP21.07■□□□□ 0.96
PCDH8-202ENST00000377942 MAD2L2Q9UI95 211 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 CCL15-CCL14A0A0B4J2E2 113 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 BUB1BO60566 1050 aaPredicted RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 CCL15Q16663 113 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 DHX40Q8IX18 779 aaKnown RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 RYBPQ8N488 228 aaPredicted RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 PRMT6Q96LA8 375 aaPredicted RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 ACAP3Q96P50 834 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 TTC26A0AVF1 554 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 GSTA1P08263 222 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 GSTA2P09210 222 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 PLS3P13797 630 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 EDRF1Q3B7T1 1238 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 RABEP2Q9H5N1 569 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 HPS5Q9UPZ3 1129 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 PITPNM2Q9BZ72 1349 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 PALMO75781 387 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 FGGP02679 453 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 SENP2Q9HC62 589 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 SPDYE2BA6NHP3 402 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 SPDYE6P0CI01 402 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 SDC4P31431 198 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 EIF3BP55884 814 aaKnown RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 COG7P83436 770 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 C4orf50Q6ZRC1 276 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 GPRASP2Q96D09 838 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 C11orf70Q9BRQ4 267 aa21.06■□□□□ 0.96
PCDH8-202ENST00000377942 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
PCDH8-202ENST00000377942 HGSO14964 777 aaPredicted RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ATP1A2P50993 1020 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 CDO1Q16878 200 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ELOA2Q8IYF1 753 aaPredicted RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ZWILCHQ9H900 591 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ANKEF1Q9NU02 776 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 PPP2R3BQ9Y5P8 575 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 S100BP04271 92 aaPredicted RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ICAM1P05362 532 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 SAT1P21673 171 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 CYP4F22Q6NT55 531 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ZNF449Q6P9G9 518 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 ATG4CQ96DT6 458 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 FMO2Q99518 471 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 TRIM62Q9BVG3 475 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 FAM217BQ9NTX9 383 aaPredicted RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 INTS9Q9NV88 658 aaKnown RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 THOC5Q13769 683 aaKnown RBP21.05■□□□□ 0.96
PCDH8-202ENST00000377942 TEX2Q8IWB9 1127 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 KIF12Q96FN5 646 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 SOX5P35711 763 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 CASP7P55210 303 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 CENPUQ71F23 418 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 PDE11AQ9HCR9 933 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 CAPN11Q9UMQ6 739 aa21.05■□□□□ 0.96
PCDH8-202ENST00000377942 TRIM49P0CI25 452 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 TRIM49CP0CI26 452 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 RAB44Q7Z6P3 723 aaPredicted RBP21.04■□□□□ 0.96
PCDH8-202ENST00000377942 REEP2Q9BRK0 252 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 ADARB2Q9NS39 739 aaKnown RBP21.04■□□□□ 0.96
PCDH8-202ENST00000377942 TUBE1Q9UJT0 475 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 F8W8V4 182 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 TAP1Q03518 808 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 PDXDC1Q6P996 788 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 MOXD1Q6UVY6 613 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 MICAL1Q8TDZ2 1067 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 IP6K2Q9UHH9 426 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 TEX33O43247 280 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 CTDNEP1O95476 244 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 MAP3K21Q5TCX8 1036 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 EMBQ6PCB8 327 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 IL25Q9H293 177 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 M0QYV0 167 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 DYNC1LI2O43237 492 aaPredicted RBP21.04■□□□□ 0.96
PCDH8-202ENST00000377942 KRT7P08729 469 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 ALS2CLQ60I27 953 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 RAPH1Q70E73 1250 aa21.04■□□□□ 0.96
PCDH8-202ENST00000377942 ZNF564Q8TBZ8 553 aaPredicted RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 HSPH1Q92598 858 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 HVCN1Q96D96 273 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 TNIP3Q96KP6 325 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 POLR3CQ9BUI4 534 aaPredicted RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 HSPBP1Q9NZL4 362 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 GOLGA8QA0A0J9YX86 632 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 GOLGA8OA6NCC3 632 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 GOLGA8NF8WBI6 632 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 HUNKP57058 714 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 LLGL1Q15334 1064 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 SCN4BQ8IWT1 228 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 TRIM56Q9BRZ2 755 aaKnown RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 KLC2Q9H0B6 622 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms