RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 USP38Q8NB14 1042 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 TPCN2Q8NHX9 752 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 MAF1Q9H063 256 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
UBR4-203ENST00000375225 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 ST6GALNAC4Q9H4F1 302 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 GOLGA6AQ9NYA3 693 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 APEX2Q9UBZ4 518 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 DNAJC12Q9UKB3 198 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 NCANO14594 1321 aa13.27□□□□□ -0.28
UBR4-203ENST00000375225 UNCXA6NJT0 531 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 EVI5O60447 810 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 PLS3P13797 630 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 SMTNP53814 917 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 KRT76Q01546 638 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 DGKZQ13574 1117 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 RHOT2Q8IXI1 618 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.29
UBR4-203ENST00000375225 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 INPP4AQ96PE3 977 aaPredicted RBP13.27□□□□□ -0.29
UBR4-203ENST00000375225 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.27□□□□□ -0.291e-10■□□□□ 10.2
UBR4-203ENST00000375225 ELP3Q9H9T3 547 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 SLC38A10Q9HBR0 1119 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
UBR4-203ENST00000375225 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 UBIAD1Q9Y5Z9 338 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 PFASO15067 1338 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
UBR4-203ENST00000375225 GOLGA6L10A0A0M3HER8 536 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 PMM2O15305 246 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 ZMYND10O75800 440 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 SYF2O95926 243 aaKnown RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 GGCXP38435 758 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 UBXN2AP68543 259 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 MTMR1Q13613 665 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 DRAP1Q14919 205 aaPredicted RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 TKFCQ3LXA3 575 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 CFAP58Q5T655 872 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 SLFN11Q7Z7L1 901 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 DAAM2Q86T65 1068 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 MREGQ8N565 214 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 FAM81BQ96LP2 452 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 STRA6Q9BX79 667 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 RRAGCQ9HB90 399 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 KCNH7Q9NS40 1196 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 COL11A1P12107 1806 aaPredicted RBP13.26□□□□□ -0.29
UBR4-203ENST00000375225 UTRNP46939 3433 aa13.26□□□□□ -0.29
UBR4-203ENST00000375225 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 WDR64B1ANS9 1081 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 H0YCG3 227 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 CXCL11O14625 94 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 MAFGO15525 162 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 CEP104O60308 925 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 PHACTR2O75167 634 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 PPP1R37O75864 691 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
UBR4-203ENST00000375225 DSG3P32926 999 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 VAMP7P51809 220 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 PSMC5P62195 406 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 SLC7A5Q01650 507 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 GUCY2DQ02846 1103 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 ENPEPQ07075 957 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 PPIL2Q13356 520 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 COG2Q14746 738 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
UBR4-203ENST00000375225 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 NLRX1Q86UT6 975 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 LRRC57Q8N9N7 239 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 XXYLT1Q8NBI6 393 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
UBR4-203ENST00000375225 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 FIZ1Q96SL8 496 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 KRT12Q99456 494 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 EPB41L5Q9HCM4 733 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 HOXC10Q9NYD6 342 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 RLFQ13129 1914 aa13.25□□□□□ -0.29
UBR4-203ENST00000375225 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
UBR4-203ENST00000375225 VWA5AO00534 786 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBR4-203ENST00000375225 ERLIN2O94905 339 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 ALAS1P13196 640 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms