RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 MAP2K2P36507 400 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 CASP4P49662 377 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 RNASE9P60153 205 aaKnown RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 ZC3H3Q8IXZ2 948 aaKnown RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
PHF1-202ENST00000374516 TMOD4Q9NZQ9 345 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 PLAAQ9Y263 795 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 AFG3L2Q9Y4W6 797 aa18.36■□□□□ 0.53
PHF1-202ENST00000374516 SRRM3A6NNA2 597 aaPredicted RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 CALUO43852 315 aaPredicted RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 NOL4O94818 638 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 NR3C1P04150 777 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 P4HBP07237 508 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 HSPA9P38646 679 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 KCNH2Q12809 1159 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 ODR4Q5SWX8 454 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 CEP85LQ5SZL2 805 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 CATSPERGQ6ZRH7 1159 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 LUC7LQ9NQ29 371 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 CEP72Q9P209 647 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 PCDHGC5Q9Y5F6 944 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 FRMPD4Q14CM0 1322 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 RAD51CO43502 376 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 FDX1P10109 184 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 MUTP22033 750 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 BMT2Q1RMZ1 405 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 PADI6Q6TGC4 694 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 MAATS1Q7Z4T9 603 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 FAM178BQ8IXR5 827 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.35■□□□□ 0.531e-7■■■□□ 17.9
PHF1-202ENST00000374516 FIZ1Q96SL8 496 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 TMBIM4Q9HC24 238 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 SPON1Q9HCB6 807 aa18.35■□□□□ 0.53
PHF1-202ENST00000374516 A1CFQ9NQ94 594 aaKnown RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 ARMCX3Q9UH62 379 aaPredicted RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 PACSIN2Q9UNF0 486 aaPredicted RBP18.35■□□□□ 0.53
PHF1-202ENST00000374516 ADM5C9JUS6 153 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 E7EVH7 732 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 HIP1RO75146 1068 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 ACTN3Q08043 901 aaPredicted RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 IFT88Q13099 833 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 VGLL4Q14135 290 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 UGCGQ16739 394 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 C6orf89Q6UWU4 347 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 ZNF720Q7Z2F6 126 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 USP38Q8NB14 1042 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.34■□□□□ 0.53
PHF1-202ENST00000374516 LSM14BQ9BX40 385 aaKnown RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 ADAMTS5Q9UNA0 930 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 PCDHB13Q9Y5F0 798 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 NR3C2P08235 984 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 QARSP47897 775 aaKnown RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 SLC18A3Q16572 532 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 DCAF17Q5H9S7 520 aaPredicted RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 DAW1Q8N136 415 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
PHF1-202ENST00000374516 PLCB1Q9NQ66 1216 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 TBC1D22BQ9NU19 505 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 PPP2R3BQ9Y5P8 575 aa18.34■□□□□ 0.53
PHF1-202ENST00000374516 CCNE2O96020 404 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 POLR2FP61218 127 aaKnown RBP18.33■□□□□ 0.53
PHF1-202ENST00000374516 KIAA0753Q2KHM9 967 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 TCERG1LQ5VWI1 586 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 ISCUQ9H1K1 167 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 CXorf56Q9H5V9 222 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 PNMA2Q9UL42 364 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.53
PHF1-202ENST00000374516 GOLGA6L10A6NI86 522 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 HPDP32754 393 aaPredicted RBP18.33■□□□□ 0.52
PHF1-202ENST00000374516 ZNF131P52739 623 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 SMTNP53814 917 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 TNNC1P63316 161 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 LRIG3Q6UXM1 1119 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 VSIG10LQ86VR7 867 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 KLHL7Q8IXQ5 586 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 ARFGAP2Q8N6H7 521 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 SAMD3Q8N6K7 520 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
PHF1-202ENST00000374516 NEK9Q8TD19 979 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 PPANQ9NQ55 473 aaKnown RBP18.33■□□□□ 0.52
PHF1-202ENST00000374516 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
PHF1-202ENST00000374516 A0A087X0T9 212 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 SORBS3O60504 671 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 FAM228BP0C875 321 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 RPL13P26373 211 aaKnown RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 RARRES1P49788 294 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms