RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ANO5Q75V66 913 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 DDX53Q86TM3 631 aaKnown RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 RHPN2Q8IUC4 686 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 C12orf76Q8N812 135 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 IGSF21Q96ID5 467 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 NRDE2Q9H7Z3 1164 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 SORCS3Q9UPU3 1222 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 B4GALT3O60512 393 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 ZNF623O75123 536 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 OFD1O75665 1012 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 GALTP07902 379 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 CTSAP10619 480 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 SKIP12755 728 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 EPCAMP16422 314 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-202ENST00000374426 SSRP1Q08945 709 aaKnown RBP15.48■□□□□ 0.07
CXCL12-202ENST00000374426 NOMO2Q5JPE7 1267 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 PLA2G4FQ68DD2 849 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 MOXD1Q6UVY6 613 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 TRIM22Q8IYM9 498 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 UBALD2Q8IYN6 164 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 BLIDQ8IZY5 108 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 DAGLBQ8NCG7 672 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 FEZF2Q8TBJ5 459 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 NLRP4Q96MN2 994 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 AIFM3Q96NN9 605 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 VN1R3Q9BXE9 311 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 INO80BQ9C086 356 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-202ENST00000374426 SMOC2Q9H3U7 446 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 DZANK1Q9NVP4 752 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 DNAJB4Q9UDY4 337 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 INPP5FQ9Y2H2 1132 aa15.48■□□□□ 0.07
CXCL12-202ENST00000374426 EML1O00423 815 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 SLC37A4O43826 429 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 ASGR2P07307 311 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 SLC11A1P49279 550 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 RAB27AP51159 221 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 PSMC5P62195 406 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 KIAA1841Q6NSI8 718 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 CATSPER4Q7RTX7 472 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 ZNF280BQ86YH2 543 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 SLC22A17Q8WUG5 538 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 IFT122Q9HBG6 1241 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
CXCL12-202ENST00000374426 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
CXCL12-202ENST00000374426 CARNS1A5YM72 827 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 ST18O60284 1047 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 REC8O95072 547 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 DEXIO95424 95 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 AFF1P51825 1210 aaKnown RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 NPEPPSP55786 919 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 RNASELQ05823 741 aaKnown RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 GIT2Q14161 759 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 NONOQ15233 471 aaKnown RBP eCLIP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 INF2Q27J81 1249 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 ATAT1Q5SQI0 421 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 AGMOQ6ZNB7 445 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 ZDHHC14Q8IZN3 488 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 TDRD5Q8NAT2 981 aaKnown RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 TMEM87AQ8NBN3 555 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 JPH2Q9BR39 696 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 CYP26B1Q9NR63 512 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 AGPAT5Q9NUQ2 364 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 WRAP73Q9P2S5 460 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-202ENST00000374426 LIMD1Q9UGP4 676 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 VAV3Q9UKW4 847 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.07
CXCL12-202ENST00000374426 FAM186AA6NE01 2351 aa15.46■□□□□ 0.06
CXCL12-202ENST00000374426 H0Y858 1186 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 CPLX1O14810 134 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-202ENST00000374426 NUBP1P53384 320 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 PPP2R5CQ13362 524 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 TMC5Q6UXY8 1006 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 CABP7Q86V35 215 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 FAM177A1Q8N128 213 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-202ENST00000374426 TMEM105Q8N8V8 129 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 ATOH1Q92858 354 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-202ENST00000374426 ZNF274Q96GC6 653 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-202ENST00000374426 IRF2BPLQ9H1B7 796 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 MINDY3Q9H8M7 445 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 KCNMB3Q9NPA1 279 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 DBR1Q9UK59 544 aaKnown RBP15.45■□□□□ 0.06
CXCL12-202ENST00000374426 USTQ9Y2C2 406 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 COL4A3BPQ9Y5P4 624 aa15.45■□□□□ 0.06
CXCL12-202ENST00000374426 GVINP1Q7Z2Y8 2422 aa15.44■□□□□ 0.06
CXCL12-202ENST00000374426 GFRA3O60609 400 aa15.44■□□□□ 0.06
CXCL12-202ENST00000374426 DDHD2O94830 711 aa15.44■□□□□ 0.06
CXCL12-202ENST00000374426 HOXA11P31270 313 aaPredicted RBP15.44■□□□□ 0.06
CXCL12-202ENST00000374426 QARSP47897 775 aaKnown RBP15.44■□□□□ 0.06
CXCL12-202ENST00000374426 LETM2Q2VYF4 491 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms