RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PFKFB1P16118 471 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 GUCY1B3Q02153 619 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 PRKCEQ02156 737 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 TUBB2AQ13885 445 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 EPC2Q52LR7 807 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 PIK3AP1Q6ZUJ8 805 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 ETNPPLQ8TBG4 499 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
COL5A1-202ENST00000371820 JPH2Q9BR39 696 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-202ENST00000371820 TUBB2BQ9BVA1 445 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 EPHX3Q9H6B9 360 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 GPR182O15218 404 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
COL5A1-202ENST00000371820 RPS6KA5O75582 802 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 UPP2O95045 317 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 C22orf31O95567 290 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 SERPINC1P01008 464 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 MMP1P03956 469 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 ATP4AP20648 1035 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 CD52P31358 61 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-202ENST00000371820 UBASH3AP57075 661 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 CDC42EP1Q00587 391 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 FANCCQ00597 558 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 TBC1D8BQ0IIM8 1120 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 TMEM62Q0P6H9 643 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 LEXMQ3ZCV2 418 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 TIGD5Q53EQ6 642 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 TRMT1LQ7Z2T5 733 aaKnown RBP11.48□□□□□ -0.57
COL5A1-202ENST00000371820 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-202ENST00000371820 SEPT9Q9UHD8 586 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-202ENST00000371820 PADI3Q9ULW8 664 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 GINS2Q9Y248 185 aa11.48□□□□□ -0.57
COL5A1-202ENST00000371820 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 H3BNC9 293 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ENPP3O14638 875 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ATP8B1O43520 1251 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 SLC37A4O43826 429 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KCNA5P22460 613 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PLA2G5P39877 138 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PSMC5P62195 406 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 CCZ1BP86790 482 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 LRMPQ12912 555 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PTPAQ15257 358 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PTPROQ16827 1216 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KRBA2Q6ZNG9 492 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 NPAS4Q8IUM7 802 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 TMEM192Q8IY95 271 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 DIS3L2Q8IYB7 885 aaKnown RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 EXOC8Q8IYI6 725 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KIAA0319LQ8IZA0 1049 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 FIBCD1Q8N539 461 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ENOX1Q8TC92 643 aaKnown RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 AGO3Q9H9G7 860 aaKnown RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 CD320Q9NPF0 282 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 C1orf112Q9NSG2 853 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ARGLU1Q9NWB6 273 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-202ENST00000371820 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 KCNH3Q9ULD8 1083 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 AKT3Q9Y243 479 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 ATG2AQ2TAZ0 1938 aa11.47□□□□□ -0.57
COL5A1-202ENST00000371820 PHLPP2Q6ZVD8 1323 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 ADGRA3Q8IWK6 1321 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 ARHGAP6O43182 974 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 ZNF862O60290 1169 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 KIF20AO95235 890 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 LINC00271P0C7V0 271 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.57
COL5A1-202ENST00000371820 DNM2P50570 870 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 GABPB1Q06547 395 aaPredicted RBP11.46□□□□□ -0.57
COL5A1-202ENST00000371820 GPM6BQ13491 265 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 COL19A1Q14993 1142 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 NT5DC1Q5TFE4 455 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 TMC6Q7Z403 805 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 BANK1Q8NDB2 785 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 NEK9Q8TD19 979 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
COL5A1-202ENST00000371820 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms