RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PIGSQ96S52 555 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 DDX23Q9BUQ8 820 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 KIAA1683Q9H0B3 1180 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 ZWILCHQ9H900 591 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 AAASQ9NRG9 546 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 HAO1Q9UJM8 370 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 EDIL3O43854 480 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 ACADSP16219 412 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 TPP2P29144 1249 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PABPC4Q13310 644 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 SLMAPQ14BN4 828 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PRR11Q96HE9 360 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 KRT82Q9NSB4 513 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 TAF1LQ8IZX4 1826 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 ACTN1P12814 892 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 SMAD1Q15797 465 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 DSTYKQ6XUX3 929 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 IRF2BP2Q7Z5L9 587 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 DAAM2Q86T65 1068 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 MXD3Q9BW11 206 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 LSM14BQ9BX40 385 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 MOV10L1Q9BXT6 1211 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 INTS9Q9NV88 658 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 RNF14Q9UBS8 474 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PRPF3O43395 683 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 CHRNB2P17787 502 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 HSPA1LP34931 641 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 ALX1Q15699 326 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■□□ 15
SMARCA1-203ENST00000371123 FAM133AQ8N9E0 248 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 POP1Q99575 1024 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 CNOT10Q9H9A5 744 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 ETNK1Q9HBU6 452 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PRM3Q9NNZ6 103 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 GALNT8Q9NY28 637 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 STK32BQ9NY57 414 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 PTPN22Q9Y2R2 807 aa9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-203ENST00000371123 SSU72P8A0A1W2PR75 194 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PDLIM1O00151 329 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 DDX3YO15523 660 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 CBX6O95503 412 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 GSTT1P30711 240 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PTGIRP43119 386 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 CYP2J2P51589 502 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PTK2Q05397 1052 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 CUL3Q13618 768 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 SLC18A3Q16572 532 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 FAM83BQ5T0W9 1011 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 SLFN11Q7Z7L1 901 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 GDAP1Q8TB36 358 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PIGOQ8TEQ8 1089 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 MAIP1Q8WWC4 291 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 DHTKD1Q96HY7 919 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 ARAP2Q8WZ64 1704 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PFASO15067 1338 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 LRRD1A4D1F6 860 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 KIAA0391O15091 583 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 ZNF131P52739 623 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 MCL1Q07820 350 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 KLHL30Q0D2K2 578 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PRKG1Q13976 671 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PALB2Q86YC2 1186 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 ANKS4BQ8N8V4 417 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 ANKRD42Q8N9B4 389 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TBCKQ8TEA7 893 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 LRRC45Q96CN5 670 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TBC1D10AQ9BXI6 508 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 KANSL3Q9P2N6 904 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 MEGF6O75095 1541 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 USP46P62068 366 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 MECOMQ03112 1051 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 WDR78Q5VTH9 848 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 NT5DC3Q86UY8 548 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 KCNN1Q92952 543 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 BICD1Q96G01 975 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms