RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 DHX40Q8IX18 779 aaKnown RBP12.05□□□□□ -0.48
BRCC3-204ENST00000369462 IKZF4Q9H2S9 585 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 RWDD2AQ9UIY3 292 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 MYL5Q02045 173 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 ALCAMQ13740 583 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 TFDP1Q14186 410 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 PTGISQ16647 500 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 BMT2Q1RMZ1 405 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 ANKRD40Q6AI12 368 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 ENOX1Q8TC92 643 aaKnown RBP12.04□□□□□ -0.48
BRCC3-204ENST00000369462 EEF2KMTQ96G04 330 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
BRCC3-204ENST00000369462 TBX20Q9UMR3 447 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 A0A087WZ62 844 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 A0A0U1RQG5 324 aaPredicted RBP12.04□□□□□ -0.48
BRCC3-204ENST00000369462 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 H0YCG3 227 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 K7ERI5 159 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 GJA8P48165 433 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 FDXACB1Q9BRP7 624 aaPredicted RBP12.04□□□□□ -0.48
BRCC3-204ENST00000369462 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
BRCC3-204ENST00000369462 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
BRCC3-204ENST00000369462 BICDL2A1A5D9 508 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
BRCC3-204ENST00000369462 GPC3P51654 580 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 NCAPHQ15003 741 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 TPD52L1Q16890 204 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-204ENST00000369462 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 SERINC5Q86VE9 423 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 ACCSQ96QU6 501 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 IFT122Q9HBG6 1241 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 NFE2L3Q9Y4A8 694 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 SMTNL1A8MU46 457 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 ARVCFO00192 962 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 IKBKBO14920 756 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-204ENST00000369462 EFNA5P52803 228 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 PTENP60484 403 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 PTPN11Q06124 597 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-204ENST00000369462 HSP90AA4PQ58FG1 418 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 TAS1R3Q7RTX0 852 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 ZBTB8OSQ8IWT0 167 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 GBP3Q9H0R5 595 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 TRPV6Q9H1D0 765 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 USP20Q9Y2K6 914 aa12.03□□□□□ -0.48
BRCC3-204ENST00000369462 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 TGFB1I1O43294 461 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 PHKA2P46019 1235 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 STRN3Q13033 797 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 SPATA1Q5VX52 437 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 CDCA2Q69YH5 1023 aaPredicted RBP12.02□□□□□ -0.48
BRCC3-204ENST00000369462 MAP4K3Q8IVH8 894 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 WNT8BQ93098 351 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 TSG101Q99816 390 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.48
BRCC3-204ENST00000369462 INO80BQ9C086 356 aaPredicted RBP12.02□□□□□ -0.48
BRCC3-204ENST00000369462 C2orf40Q9H1Z8 148 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 TMEM206Q9H813 350 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 MINDY3Q9H8M7 445 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 FANCLQ9NW38 375 aa12.02□□□□□ -0.48
BRCC3-204ENST00000369462 UBE4BO95155 1302 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 ZMYM2Q9UBW7 1377 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 PDXKO00764 312 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
BRCC3-204ENST00000369462 CDC42EP1Q00587 391 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 LRRC63Q05C16 580 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 POU5F1BQ06416 359 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 MAPK6Q16659 721 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 HS2ST1Q7LGA3 356 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 NME8Q8N427 588 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
BRCC3-204ENST00000369462 HVCN1Q96D96 273 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
BRCC3-204ENST00000369462 TYW1Q9NV66 732 aaKnown RBP12.02□□□□□ -0.49
BRCC3-204ENST00000369462 TISP43B9A030 160 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 HNRNPDLO14979 420 aaKnown RBP12.01□□□□□ -0.49
BRCC3-204ENST00000369462 B4GALT4O60513 344 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 GPR32O75388 356 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 SCP2P22307 547 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 ABCD1P33897 745 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 ZNF410Q86VK4 478 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 BICD1Q96G01 975 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 OSMRQ99650 979 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms