RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 KATNA1O75449 491 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CTSBP07858 339 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 SERPINB3P29508 390 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 TRPC1P48995 793 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 APBA1Q02410 837 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 ITKQ08881 620 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF252P-AS1Q0IIN9 211 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 STK3Q13188 491 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 MBTPS1Q14703 1052 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 SAFBQ15424 915 aaKnown RBP eCLIP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CRY2Q49AN0 593 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 EXOSC6Q5RKV6 272 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 FDX2Q6P4F2 183 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 C1orf228Q6PIY5 440 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 DPP8Q6V1X1 898 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 C1orf122Q6ZSJ8 110 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 ZBTB46Q86UZ6 589 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 TXNRD3Q86VQ6 643 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 SMG8Q8ND04 991 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 PHC3Q8NDX5 983 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 ACRBPQ8NEB7 543 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 WDR66Q8TBY9 1149 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 NUP133Q8WUM0 1156 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CPLX3Q8WVH0 158 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 ZKSCAN4Q969J2 545 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 VMP1Q96GC9 406 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CHAMP1Q96JM3 812 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 TMEM74Q96NL1 305 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 MRPL9Q9BYD2 267 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 TMPRSS13Q9BYE2 586 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CCDC86Q9H6F5 360 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 YY1AP1Q9H869 796 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 CYP4F12Q9HCS2 524 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 PRDM5Q9NQX1 630 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 COMMD8Q9NX08 183 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 MAPRE3Q9UPY8 281 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 BRWD1Q9NSI6 2320 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 MYO18BQ8IUG5 2567 aa4.01□□□□□ -1.77
ECHDC1-205ENST00000368295 PDE8AO60658 829 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 SASH1O94885 1247 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ECEL1O95672 775 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NAT2P11245 290 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 GBP2P32456 591 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 CTNNA1P35221 906 aaKnown RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 NF2P35240 595 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 FLT3LGP49771 235 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NAP1L1P55209 391 aaKnown RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 PRMT2P55345 433 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 PLIN5Q00G26 463 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 LMNB2Q03252 620 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 PTPN14Q15678 1187 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 DDR2Q16832 855 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ZC3H12BQ5HYM0 836 aaKnown RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 LMBRD2Q68DH5 695 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 ISM2Q6H9L7 571 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 Q6ZS46 218 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 EEPD1Q7L9B9 569 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 AGGF1Q8N302 714 aaeCLIP4□□□□□ -1.77
ECHDC1-205ENST00000368295 AFAP1L2Q8N4X5 818 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 CRACR2BQ8N4Y2 399 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 ARL10Q8N8L6 244 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 WFDC12Q8WWY7 111 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ATP6V1E2Q96A05 226 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 TTC17Q96AE7 1141 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 OPTNQ96CV9 577 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NELL2Q99435 816 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 RHOBTB2Q9BYZ6 727 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ZC3H12CQ9C0D7 883 aaKnown RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 OSBPL5Q9H0X9 879 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 MIR1-1HGQ9H1L0 117 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 MYOZ2Q9NPC6 264 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NLRC4Q9NPP4 1024 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 RAD18Q9NS91 495 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 GINM1Q9NU53 330 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 CPSF2Q9P2I0 782 aaKnown RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 RABL2BQ9UNT1 228 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ABCA12Q86UK0 2595 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 TECTAO75443 2155 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 A0A087WZG4 1122 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 DCXO43602 365 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ECE2O60344 883 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 TPPPO94811 219 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 AGR2O95994 175 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 A1BGP04217 495 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 CCDC175P0C221 793 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 HSD3B1P14060 373 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ATF7P17544 494 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 TFE3P19532 575 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 RPS6KB1P23443 525 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NOS3P29474 1203 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 COPAP53621 1224 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 SATB1Q01826 763 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 COBLL1Q53SF7 1204 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 SNAP47Q5SQN1 464 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 RASIP1Q5U651 963 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 HIBCHQ6NVY1 386 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF449Q6P9G9 518 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 CCDC129Q6ZRS4 1044 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 RNF180Q86T96 592 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms