RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TXNDC9O14530 226 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 CYP26A1O43174 497 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 RPA1P27694 616 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 BAG6P46379 1132 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 TRIM59Q8IWR1 403 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.41
COPA-202ENST00000368069 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
COPA-202ENST00000368069 RIC1Q4ADV7 1423 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SLC26A4O43511 780 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 MED7O43513 233 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 PSMC5P62195 406 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 FIGNQ5HY92 759 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SLC10A5Q5PT55 438 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 ICE2Q659A1 982 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 DDX42Q86XP3 938 aaKnown RBP eCLIP12.51□□□□□ -0.416e-6■□□□□ 9.2
COPA-202ENST00000368069 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.415e-6■■■■■ 37.4
COPA-202ENST00000368069 DCCP43146 1447 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 AFF2P51816 1311 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 TJP3O95049 919 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 IRAK1P51617 712 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 KCTD2Q14681 263 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CATSPER3Q86XQ3 398 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 NME8Q8N427 588 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CHMP6Q96FZ7 201 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 A0A087X0T9 212 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 RASA4BC9J798 803 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CAPN9O14815 690 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 RASA4O43374 803 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 BAG2O95816 211 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 FAM228BP0C875 321 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CYP11B2P19099 503 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 FGFR4P22455 802 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 HHIPL2Q6UWX4 724 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 MORC4Q8TE76 937 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
COPA-202ENST00000368069 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
COPA-202ENST00000368069 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 PITPNM3Q9BZ71 974 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 EPN3Q9H201 632 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 KIAA1586Q9HCI6 787 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 RNF146Q9NTX7 359 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
COPA-202ENST00000368069 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
COPA-202ENST00000368069 LDHAP00338 332 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 PSMA2P25787 234 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SFNP31947 248 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 KIAA1755Q5JYT7 1200 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 OR6B2Q6IFH4 312 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 PRPF38AQ8NAV1 312 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 FBXL13Q8NEE6 735 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.413e-9■■■□□ 16.8
COPA-202ENST00000368069 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 TTC7AQ9ULT0 858 aaPredicted RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 FER1L4A9Z1Z3 1794 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SMIM22K7EJ46 135 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 CPP00450 1065 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 MARK3P27448 753 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 RCN2Q14257 317 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 LRRC14Q15048 493 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 ZNF449Q6P9G9 518 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 RTN2O75298 545 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 CDK17Q00537 523 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SWSAP1Q6NVH7 229 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 THNSL1Q8IYQ7 743 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 GGPS1O95749 300 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 RNASELQ05823 741 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 GRM1Q13255 1194 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms