RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PGRMC1O00264 195 aaKnown RBP21.66■■□□□ 1.06
CDC42BPB-201ENST00000361246 P4HBP07237 508 aaKnown RBP21.66■■□□□ 1.06
CDC42BPB-201ENST00000361246 MB21D1Q8N884 522 aa21.66■■□□□ 1.06
CDC42BPB-201ENST00000361246 DDHD2O94830 711 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 TRIM49P0CI25 452 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 TRIM49CP0CI26 452 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 XXYLT1Q8NBI6 393 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 HAUS8Q9BT25 410 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 FRMD3A2A2Y4 597 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 COG2Q14746 738 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 AGR3Q8TD06 166 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 RALAP11233 206 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 SIRT2Q8IXJ6 389 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 ASNSD1Q9NWL6 643 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 SUFUQ9UMX1 484 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 CCNE1P24864 410 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 SULT1E1P49888 294 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 DR1Q01658 176 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 DHX9Q08211 1270 aaKnown RBP21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 HIPK4Q8NE63 616 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 L3MBTL3Q96JM7 780 aaPredicted RBP21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 PLA2G4FQ68DD2 849 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 FAM81BQ96LP2 452 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 ORC6Q9Y5N6 252 aa21.65■■□□□ 1.06
CDC42BPB-201ENST00000361246 KRT31Q15323 416 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 NUP85Q9BW27 656 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 AGO2Q9UKV8 859 aaKnown RBP21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 RPS6KA5O75582 802 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 PRKCBP05771 671 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 NFKBIAP25963 317 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 FOXO4P98177 505 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 AMHR2Q16671 573 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 STRIP2Q9ULQ0 834 aa21.64■■□□□ 1.06
CDC42BPB-201ENST00000361246 RAPGEF5Q92565 580 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 VPS11Q9H270 941 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 RSPH10B2B2RC85 870 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 TRPA1O75762 1119 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 PALMO75781 387 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 TJP3O95049 919 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 RSPH10BP0C881 870 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 CDC42EP5Q6NZY7 148 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 TTC17Q96AE7 1141 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 MUC3BQ9H195 1237 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 ABCA8O94911 1581 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 ATP9BO43861 1147 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 PRCPP42785 496 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 GNASQ5JWF2 1037 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 C2orf40Q9H1Z8 148 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 SH3GLB2Q9NR46 395 aa21.64■■□□□ 1.05
CDC42BPB-201ENST00000361246 CCDC38Q502W7 563 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 KLK14Q9P0G3 267 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 NLRP11P59045 1033 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 ADCK2Q7Z695 626 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 DGKHQ86XP1 1220 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 WHAMMQ8TF30 809 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 RUNDC3BQ96NL0 473 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 FGGP02679 453 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 NMT1P30419 496 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 OTULINQ96BN8 352 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 HNRNPCL2B2RXH8 293 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 H3BRJ5 948 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 HNRNPCL1O60812 293 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 GRM4Q14833 912 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 TRIM59Q8IWR1 403 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 AGAP3Q96P47 875 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 ATP1A3P13637 1013 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 TOGARAM2Q6ZUX3 1019 aa21.63■■□□□ 1.05
CDC42BPB-201ENST00000361246 OR6P1Q8NGX9 317 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 GRAP2O75791 330 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 ALCAMQ13740 583 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 ZC3H18Q86VM9 953 aaKnown RBP21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 KLC2Q9H0B6 622 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 PACSIN2Q9UNF0 486 aaPredicted RBP21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 AGAP1Q9UPQ3 857 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 ARL4DP49703 201 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 MKRN4PQ13434 485 aaPredicted RBP21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.62■■□□□ 1.052e-6■■■□□ 15.6
CDC42BPB-201ENST00000361246 CLTCQ00610 1675 aaKnown RBP21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 RESTQ13127 1097 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 CHEK2O96017 543 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 APOEP02649 317 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 ZNF512Q96ME7 567 aaPredicted RBP21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 RASSF4Q9H2L5 321 aa21.62■■□□□ 1.05
CDC42BPB-201ENST00000361246 KCNH2Q12809 1159 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 SNX9Q9Y5X1 595 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 MYRIPQ8NFW9 859 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 ULK4Q96C45 1275 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 VCX3AQ9NNX9 186 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 CASS4Q9NQ75 786 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 DAGLAQ9Y4D2 1042 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 A0A1W2PQ27 194 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 A0A1W2PQ64 194 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 A0A1W2PQD8 194 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 HSPA4LO95757 839 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 ALDH1A1P00352 501 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 CHGBP05060 677 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 UNC13DQ70J99 1090 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms