RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SFR1Q86XK3 245 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 RASAL3Q86YV0 1011 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 SLC35F6Q8N357 371 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 PSPC1Q8WXF1 523 aaKnown RBP7.58□□□□□ -1.2
RAB5B-201ENST00000360299 RSAD2Q8WXG1 361 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 PDLIM2Q96JY6 352 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 PSMB7Q99436 277 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 C7orf25Q9BPX7 421 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 TMEM260Q9NX78 707 aa7.58□□□□□ -1.2
RAB5B-201ENST00000360299 STXBP3O00186 592 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 FDPSP14324 419 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 AP3M2P53677 418 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 DENND2CQ68D51 928 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ARMCX2Q7L311 632 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 SAPCD2Q86UD0 394 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 EEF2KMTQ96G04 330 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MOV10L1Q9BXT6 1211 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 KIAA1683Q9H0B3 1180 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MFSD1Q9H3U5 465 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 SMARCAD1Q9H4L7 1026 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 PDXKO00764 312 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 BUB1O43683 1085 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 CDC42EP1Q00587 391 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ITIH3Q06033 890 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 KRT81Q14533 505 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TREML2Q5T2D2 321 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MOXD1Q6UVY6 613 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 C15orf52Q6ZUT6 534 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ENOSF1Q7L5Y1 443 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 DYDC2Q96IM9 177 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 PASKQ96RG2 1323 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 RIT2Q99578 217 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MTG1Q9BT17 334 aaPredicted RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM7Q9C029 511 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 UBE2TQ9NPD8 197 aaPredicted RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TUBE1Q9UJT0 475 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 SLC15A5A6NIM6 579 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 E9PMD0 336 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TDP2O95551 362 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 PHBP35232 272 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 RPS6P62753 249 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 EHHADHQ08426 723 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 FSCN1Q16658 493 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 PIGOQ8TEQ8 1089 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 GANCQ8TET4 914 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 SMC6Q96SB8 1091 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MSTO1Q9BUK6 570 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM31Q9BZY9 425 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM9Q9C026 710 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 MED4Q9NPJ6 270 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 FAM114A2Q9NRY5 505 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 FAM198AQ9UFP1 575 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 HPS5Q9UPZ3 1129 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 POTEB3A0JP26 581 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 POTECB2RU33 542 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 CCL5P13501 91 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ANXA13P27216 316 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ACVR2BQ13705 512 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ALKBH5Q6P6C2 394 aaKnown RBP7.57□□□□□ -1.2
RAB5B-201ENST00000360299 POTEBQ6S5H4 581 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 FRMD5Q7Z6J6 570 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 CCHCR1Q8TD31 782 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF653Q96CK0 615 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 PCIF1Q9H4Z3 704 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 SPTLC3Q9NUV7 552 aa7.57□□□□□ -1.2
RAB5B-201ENST00000360299 RIC1Q4ADV7 1423 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 C2CD2LO14523 706 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 CLDN3O15551 220 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 RHOBTB3O94955 611 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 AMHP03971 560 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 EFNA5P52803 228 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 TFAMQ00059 246 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 GRIK5Q16478 980 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 RINT1Q6NUQ1 792 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 RNF10Q8N5U6 811 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 RDM1Q8NG50 284 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 FBF1Q8TES7 1133 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 SEPT1Q8WYJ6 367 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 TOPORSQ9NS56 1045 aaPredicted RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 ANO9A1A5B4 782 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 PGRMC1O00264 195 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 MUTP22033 750 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 FXR2P51116 673 aaKnown RBP eCLIP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 SNRPFP62306 86 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 ERCC6LQ2NKX8 1250 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 FAM133AQ8N9E0 248 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 TAAR1Q96RJ0 339 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 MTRQ99707 1265 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 IDI2Q9BXS1 227 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 SNX25Q9H3E2 840 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 ABHD16BQ9H3Z7 469 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 RSPH14Q9UHP6 348 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 SCINQ9Y6U3 715 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 SMIM23A6NLE4 172 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 PPFIA4O75335 1185 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 CTDNEP1O95476 244 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms