RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 F2P00734 622 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 LAMTOR4Q0VGL1 99 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 MXD4Q14582 209 aaPredicted RBP25.38■■□□□ 1.65
SDF4-202ENST00000360001 EFCAB12Q6NXP0 572 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 SLC39A4Q6P5W5 647 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 FAM186BQ8IYM0 893 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.38■■□□□ 1.654e-12■□□□□ 10.1
SDF4-202ENST00000360001 EVPLQ92817 2033 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 GYPCP04921 128 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 KLRC1P26715 233 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 CNGA1P29973 690 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 CPT1AP50416 773 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 RBL2Q08999 1139 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 TRIM32Q13049 653 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 SYCP1Q15431 976 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 KAT2BQ92831 832 aa25.38■■□□□ 1.65
SDF4-202ENST00000360001 SUCLA2Q9P2R7 463 aaPredicted RBP25.38■■□□□ 1.65
SDF4-202ENST00000360001 ADCY3O60266 1144 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 ADSSP30520 456 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 CLCN3P51790 818 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 CCZ1BP86790 482 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 CCZ1P86791 482 aaPredicted RBP25.37■■□□□ 1.65
SDF4-202ENST00000360001 PPFIBP1Q86W92 1011 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 LINC01465Q8N7H1 131 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 TC2NQ8N9U0 490 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 PCIF1Q9H4Z3 704 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 SRRDQ9UH36 339 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 FRMD4BQ9Y2L6 1034 aa25.37■■□□□ 1.65
SDF4-202ENST00000360001 GPR25O00155 361 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 MAGEB2O15479 319 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 EXOC3O60645 756 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 DUSP11O75319 330 aaKnown RBP25.36■■□□□ 1.65
SDF4-202ENST00000360001 PPFIA1Q13136 1202 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 BRDTQ58F21 947 aaPredicted RBP25.36■■□□□ 1.65
SDF4-202ENST00000360001 METTL13Q8N6R0 699 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 RETREG2Q8NC44 543 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 TMEM134Q9H6X4 195 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 HSPBP1Q9NZL4 362 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 PYCARDQ9ULZ3 195 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 KLK7P49862 253 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 BEX3Q00994 111 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 GRIK4Q16099 956 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 CDCA2Q69YH5 1023 aaPredicted RBP25.36■■□□□ 1.65
SDF4-202ENST00000360001 SIK3Q9Y2K2 1263 aa25.36■■□□□ 1.65
SDF4-202ENST00000360001 K7ERI5 159 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 ADKP55263 362 aaKnown RBP25.35■■□□□ 1.65
SDF4-202ENST00000360001 PPP2R3AQ06190 1150 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 CACNB2Q08289 660 aaPredicted RBP25.35■■□□□ 1.65
SDF4-202ENST00000360001 KCNH2Q12809 1159 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 TRIM14Q14142 442 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 MARCH8Q5T0T0 291 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 CCDC155Q8N6L0 562 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 PHLPP2Q6ZVD8 1323 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 AKR1B15C9JRZ8 316 aaPredicted RBP25.35■■□□□ 1.65
SDF4-202ENST00000360001 HNRNPDLO14979 420 aaKnown RBP25.35■■□□□ 1.65
SDF4-202ENST00000360001 GJB1P08034 283 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 ELNP15502 786 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 CASP14P31944 242 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 FXR1P51114 621 aaKnown RBP eCLIP25.35■■□□□ 1.65
SDF4-202ENST00000360001 STRN3Q13033 797 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 FSCN1Q16658 493 aaKnown RBP25.35■■□□□ 1.65
SDF4-202ENST00000360001 MTHFD1LQ6UB35 978 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 RHPN2Q8IUC4 686 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 XXYLT1Q8NBI6 393 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 RNF149Q8NC42 400 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 CPLX3Q8WVH0 158 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 SLC35C1Q96A29 364 aa25.35■■□□□ 1.65
SDF4-202ENST00000360001 CENPFP49454 3210 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 KAT6AQ92794 2004 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 SRGAP2CP0DJJ0 459 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 HOXD10P28358 340 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 KIAA0753Q2KHM9 967 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 ZSWIM2Q8NEG5 633 aa25.34■■□□□ 1.65
SDF4-202ENST00000360001 RNF225M0QZC1 329 aaPredicted RBP25.33■■□□□ 1.65
SDF4-202ENST00000360001 SEPT4O43236 478 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 MFAP3LO75121 409 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 PIGRP01833 764 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 EFNA5P52803 228 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 DCAF17Q5H9S7 520 aaPredicted RBP25.33■■□□□ 1.65
SDF4-202ENST00000360001 BICD1Q96G01 975 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 TTYH3Q9C0H2 523 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 CCDC113Q9H0I3 377 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 TMX1Q9H3N1 280 aa25.33■■□□□ 1.65
SDF4-202ENST00000360001 HAS3O00219 553 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 ASAP2O43150 1006 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 EDN1P05305 212 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 MYL3P08590 195 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 SKILP12757 684 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 MSNP26038 577 aaKnown RBP25.33■■□□□ 1.64
SDF4-202ENST00000360001 GJA9P57773 515 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 MFSD10Q14728 455 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 RDH13Q8NBN7 331 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 SETD4Q9NVD3 440 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 USP20Q9Y2K6 914 aa25.33■■□□□ 1.64
SDF4-202ENST00000360001 MYADML2A6NDP7 307 aa25.32■■□□□ 1.64
SDF4-202ENST00000360001 AFPP02771 609 aaKnown RBP25.32■■□□□ 1.64
SDF4-202ENST00000360001 SMIM10L2AP0DMW4 78 aa25.32■■□□□ 1.64
SDF4-202ENST00000360001 SMIM10L2BP0DMW5 78 aa25.32■■□□□ 1.64
SDF4-202ENST00000360001 GARTP22102 1010 aa25.32■■□□□ 1.64
SDF4-202ENST00000360001 HTTP42858 3142 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms