RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RHOXF2Q9BQY4 288 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 PCIF1Q9H4Z3 704 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 KMT5AQ9NQR1 393 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 NAGPAQ9UK23 515 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 AJAP1Q9UKB5 411 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 NENFQ9UMX5 172 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 PCDHGC5Q9Y5F6 944 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 TARSL2A2RTX5 802 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 F8VZ95 297 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 BUB1O43683 1085 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 SUPT20HL2P0C7V6 817 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 KLRC1P26715 233 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 NPTX2P47972 431 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 PPATQ06203 517 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 XKR3Q5GH77 459 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 TREML2Q5T2D2 321 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 CCDC70Q6NSX1 233 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 WDR93Q6P2C0 686 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 ALKBH5Q6P6C2 394 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 SH2D3AQ9BRG2 576 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 CBWD1Q9BRT8 395 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 RNF14Q9UBS8 474 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 EMSYQ7Z589 1322 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 IGSF9BQ9UPX0 1349 aa19.9■□□□□ 0.78
PDLIM7-203ENST00000359895 SCP2P22307 547 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 PRKCEQ02156 737 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 DRAP1Q14919 205 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 GJB7Q6PEY0 223 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 CREG2Q8IUH2 290 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 PNKPQ96T60 521 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 PDLIM7Q9NR12 457 aa19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 SEPT9Q9UHD8 586 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-203ENST00000359895 ADM5C9JUS6 153 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 CXCL11O14625 94 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 EVI5O60447 810 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 SEC31AO94979 1220 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 ATG7O95352 703 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 NF2P35240 595 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 ALDH5A1P51649 535 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 ENPEPQ07075 957 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 GADL1Q6ZQY3 521 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 CCDC60Q8IWA6 550 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 IFT74Q96LB3 600 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 TLR10Q9BXR5 811 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 CYP26B1Q9NR63 512 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 USP20Q9Y2K6 914 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 LRRC37A2A6NM11 1700 aa19.88■□□□□ 0.77
PDLIM7-203ENST00000359895 A0A0A6YYK5 440 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 A0A0G2JLL6 359 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 DENND3A2RUS2 1198 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 ZNF185O15231 689 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 PALMO75781 387 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 TBC1D8O95759 1140 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 PAFAH1B1P43034 410 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 LONRF2Q1L5Z9 754 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 EPC2Q52LR7 807 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 CCDC181Q5TID7 509 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 TRMT1LQ7Z2T5 733 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 PRRT2Q7Z6L0 340 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 ERO1BQ86YB8 467 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 MMGT1Q8N4V1 131 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 LMO3Q8TAP4 145 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 BTBD7Q9P203 1132 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 SIP14410 1827 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 TISP43B9A030 160 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 H2AFZP0C0S5 128 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 COPB2P35606 906 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 IRX3P78415 501 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 NFRKBQ6P4R8 1299 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 H2AFVQ71UI9 128 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 USP37Q86T82 979 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 ANKRD13AQ8IZ07 590 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 RUBCNQ92622 972 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 PACSIN1Q9BY11 444 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 SPATC1LQ9H0A9 340 aa19.87■□□□□ 0.77
PDLIM7-203ENST00000359895 PDE2AO00408 941 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 IRF6O14896 467 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 CNGA1P29973 690 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 DLG4P78352 724 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 CNTN2Q02246 1040 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 PPP3CAQ08209 521 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 KIF22Q14807 665 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 MEI1Q5TIA1 1274 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 SLC30A5Q8TAD4 765 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 TMC2Q8TDI7 906 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 LMBR1Q8WVP7 490 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 BSNDQ8WZ55 320 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 MPHOSPH6Q99547 160 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 ZNF302Q9NR11 478 aa19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 MAFBQ9Y5Q3 323 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-203ENST00000359895 ANKRD63C9JTQ0 380 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 DDX3XO00571 662 aaKnown RBP eCLIP19.85■□□□□ 0.771e-16■■■□□ 15.4
PDLIM7-203ENST00000359895 SLC25A27O95847 323 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 GARTP22102 1010 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 EDNRBP24530 442 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 MXI1P50539 228 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 VSNL1P62760 191 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 SP4Q02446 784 aa19.85■□□□□ 0.77
PDLIM7-203ENST00000359895 SNRNP35Q16560 246 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms