RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 LIMA1Q9UHB6 759 aaKnown RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 DENND3A2RUS2 1198 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 INHAP05111 366 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 RARBP10826 455 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 CDK11BP21127 795 aaKnown RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 NAMPTP43490 491 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 SMTNP53814 917 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 UBASH3AP57075 661 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 ADAM17P78536 824 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 PPFIA1Q13136 1202 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 ALCAMQ13740 583 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 MFSD10Q14728 455 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 GRIK4Q16099 956 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 GNASQ5JWF2 1037 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 MTHFD1LQ6UB35 978 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 LRRC8AQ8IWT6 810 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 NOC3LQ8WTT2 800 aaKnown RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 CACTINQ8WUQ7 758 aaKnown RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 TBX20Q9UMR3 447 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 SCN10AQ9Y5Y9 1956 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 A0A1B0GTH6 734 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 CLIC2O15247 247 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
CXCL12-201ENST00000343575 SERPINC1P01008 464 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 SMIM10L2AP0DMW4 78 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 SMIM10L2BP0DMW5 78 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 PSEN2P49810 448 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 PRMT2P55345 433 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 LAMTOR4Q0VGL1 99 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 LRMPQ12912 555 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 NR1I3Q14994 352 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 PTPN21Q16825 1174 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 NYAP1Q6ZVC0 841 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 IFT74Q96LB3 600 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 TSG101Q99816 390 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 BEGAINQ9BUH8 593 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 GBP3Q9H0R5 595 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 AGPAT3Q9NRZ7 376 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 FAM53CQ9NYF3 392 aa16.11■□□□□ 0.17
CXCL12-201ENST00000343575 EDN1P05305 212 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 HOXC8P31273 242 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 GRK4P32298 578 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 ADAM9Q13443 819 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 NFIL3Q16649 462 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 EXOC8Q8IYI6 725 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 METTL13Q8N6R0 699 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 SLC17A8Q8NDX2 589 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 ACCSQ96QU6 501 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 USP20Q9Y2K6 914 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 MAGEB2O15479 319 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 TEX33O43247 280 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 NR3C1P04150 777 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 NR2F2P24468 414 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 EEF1GP26641 437 aaKnown RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 ADSSP30520 456 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 CASP4P49662 377 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 ARHGEF6Q15052 776 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 LHX8Q68G74 356 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 CXCL17Q6UXB2 119 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 TCP11Q8WWU5 503 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 PSPC1Q8WXF1 523 aaKnown RBP16.1■□□□□ 0.17
CXCL12-201ENST00000343575 CEP63Q96MT8 703 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 IMPACTQ9P2X3 320 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 SIP14410 1827 aa16.1■□□□□ 0.17
CXCL12-201ENST00000343575 NRCAMQ92823 1304 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 LRRIQ4A6NIV6 560 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 AKAP3O75969 853 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 KCNJ6P48051 423 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 ZNF200P98182 395 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 SPAG1Q07617 926 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 PPP2R5AQ15172 486 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 MIIPQ5JXC2 388 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 CDCA2Q69YH5 1023 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 KIAA0319LQ8IZA0 1049 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms