RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 EFCAB12Q6NXP0 572 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 PRPF31Q8WWY3 499 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 CGNQ9P2M7 1197 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 SUCLA2Q9P2R7 463 aaPredicted RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 ARMCX3Q9UH62 379 aaPredicted RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 Q9Y3F1 56 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19■□□□□ 0.63
CLDN4-201ENST00000340958 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19■□□□□ 0.63
CLDN4-201ENST00000340958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19■□□□□ 0.63
CLDN4-201ENST00000340958 A6NJR5 290 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 ZBTB42B2RXF5 422 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 SLC16A3O15427 465 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 NRDCO43847 1150 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 EXOC3O60645 756 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 HMGCRP04035 888 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 SFPQP23246 707 aaKnown RBP eCLIP19■□□□□ 0.63
CLDN4-201ENST00000340958 MSNP26038 577 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 PSMC2P35998 433 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 PPFIA1Q13136 1202 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 ZC3H3Q8IXZ2 948 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 NDST4Q9H3R1 872 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 SPC25Q9HBM1 224 aa19■□□□□ 0.63
CLDN4-201ENST00000340958 METTL14Q9HCE5 456 aaKnown RBP19■□□□□ 0.63
CLDN4-201ENST00000340958 MKI67P46013 3256 aaKnown RBP18.99■□□□□ 0.63
CLDN4-201ENST00000340958 K7ERI5 159 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 MAGEB2O15479 319 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 SRGAP2CP0DJJ0 459 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 TMOD1P28289 359 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 FRMD5Q7Z6J6 570 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 RHPN2Q8IUC4 686 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 PCIF1Q9H4Z3 704 aa18.99■□□□□ 0.63
CLDN4-201ENST00000340958 HNRNPDLO14979 420 aaKnown RBP18.98■□□□□ 0.63
CLDN4-201ENST00000340958 AKAP3O75969 853 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 SCP2P22307 547 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 KLRC1P26715 233 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 SNRPFP62306 86 aaKnown RBP18.98■□□□□ 0.63
CLDN4-201ENST00000340958 DRP2Q13474 957 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 TFDP1Q14186 410 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 NFIL3Q16649 462 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 DCAF17Q5H9S7 520 aaPredicted RBP18.98■□□□□ 0.63
CLDN4-201ENST00000340958 TCERG1LQ5VWI1 586 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 MAP4K3Q8IVH8 894 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 FAM186BQ8IYM0 893 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 CPLX3Q8WVH0 158 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 ADGRA3Q8IWK6 1321 aa18.98■□□□□ 0.63
CLDN4-201ENST00000340958 C6orf222P0C671 652 aaPredicted RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 HOXD8P13378 290 aaPredicted RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 LIG4P49917 911 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 BEX3Q00994 111 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 LAMTOR4Q0VGL1 99 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 FSCN1Q16658 493 aaKnown RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 MIIPQ5JXC2 388 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 ZBTB8OSQ8IWT0 167 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 LRRC8AQ8IWT6 810 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 NLRP4Q96MN2 994 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 ARHGAP28Q9P2N2 729 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 COL1A2P08123 1366 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 DUSP11O75319 330 aaKnown RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 RARBP10826 455 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 CYBAP13498 195 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 CCL5P13501 91 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 CASP4P49662 377 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 CLCN3P51790 818 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 MARSP56192 900 aaKnown RBP18.97■□□□□ 0.63
CLDN4-201ENST00000340958 CAPSQ13938 189 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 GRIK4Q16099 956 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 KIAA0753Q2KHM9 967 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 ZBTB10Q96DT7 871 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 AKT3Q9Y243 479 aa18.97■□□□□ 0.63
CLDN4-201ENST00000340958 ITIH6Q6UXX5 1313 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 IGKV6-21A0A0C4DH24 114 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 A0A1W2PQC6 194 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 TISP43B9A030 160 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 C22orf31O95567 290 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 IGHA2P01877 340 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 PBX1P40424 430 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 MATR3P43243 847 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLDN4-201ENST00000340958 MYBPC2Q14324 1141 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 RNF149Q8NC42 400 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 CACTINQ8WUQ7 758 aaKnown RBP18.96■□□□□ 0.63
CLDN4-201ENST00000340958 POMGNT1Q8WZA1 660 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 KATNAL1Q9BW62 490 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 ZKSCAN5Q9Y2L8 839 aa18.96■□□□□ 0.63
CLDN4-201ENST00000340958 RRN3P2A6NIE6 340 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 AKR1B15C9JRZ8 316 aaPredicted RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 KRT13P13646 458 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 PPP2R3AQ06190 1150 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 CACNB2Q08289 660 aaPredicted RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 LRMPQ12912 555 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 TRIM14Q14142 442 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MFSD10Q14728 455 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms