RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 EXOC8Q8IYI6 725 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 HAS1Q92839 578 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 GBP3Q9H0R5 595 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 WRAP73Q9P2S5 460 aaPredicted RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 FAM205CA6NFA0 338 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 TBX3O15119 743 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 YWHABP31946 246 aaKnown RBP21.73■■□□□ 1.07
ITGA4-202ENST00000339307 SMC1AQ14683 1233 aaKnown RBP21.73■■□□□ 1.07
ITGA4-202ENST00000339307 XKR9Q5GH70 373 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 GLB1LQ6UWU2 654 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 TPH2Q8IWU9 490 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 SLFN12Q8IYM2 578 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 SLC39A11Q8N1S5 342 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 PRPF31Q8WWY3 499 aaKnown RBP21.73■■□□□ 1.07
ITGA4-202ENST00000339307 PSPC1Q8WXF1 523 aaKnown RBP21.73■■□□□ 1.07
ITGA4-202ENST00000339307 TMEM169Q96HH4 297 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 FAM105AQ9NUU6 356 aa21.73■■□□□ 1.07
ITGA4-202ENST00000339307 RFC5P40937 340 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 TRIM29Q14134 588 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 ME3Q16798 604 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 PHF7Q9BWX1 381 aaPredicted RBP21.72■■□□□ 1.07
ITGA4-202ENST00000339307 CXCL14O95715 111 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 FDPSP14324 419 aaKnown RBP21.72■■□□□ 1.07
ITGA4-202ENST00000339307 RAB27AP51159 221 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 ANKRD54Q6NXT1 300 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 C4orf19Q8IY42 314 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 PGBD4Q96DM1 585 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 ZSWIM4Q9H7M6 989 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 IFT122Q9HBG6 1241 aa21.72■■□□□ 1.07
ITGA4-202ENST00000339307 ZBTB39O15060 712 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 LARGE1O95461 756 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 SP100P23497 879 aaPredicted RBP21.71■■□□□ 1.07
ITGA4-202ENST00000339307 NEK4P51957 841 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 LAMTOR4Q0VGL1 99 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 EMC2Q15006 297 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 HERC4Q5GLZ8 1057 aaPredicted RBP21.71■■□□□ 1.07
ITGA4-202ENST00000339307 NOMO2Q5JPE7 1267 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 TCP11Q8WWU5 503 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 GTF3C6Q969F1 213 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 CCDC43Q96MW1 224 aaKnown RBP21.71■■□□□ 1.07
ITGA4-202ENST00000339307 DHX33Q9H6R0 707 aaKnown RBP21.71■■□□□ 1.07
ITGA4-202ENST00000339307 ARIH1Q9Y4X5 557 aaPredicted RBP21.71■■□□□ 1.07
ITGA4-202ENST00000339307 PCDHB2Q9Y5E7 798 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 C5orf42Q9H799 3197 aa21.71■■□□□ 1.07
ITGA4-202ENST00000339307 MEIS3P2A8K0S8 358 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 CALCRLQ16602 461 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 VPS52Q8N1B4 723 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 MRPL43Q8N983 215 aaKnown RBP21.7■■□□□ 1.06
ITGA4-202ENST00000339307 RNF149Q8NC42 400 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 URGCPQ8TCY9 931 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 MTRQ99707 1265 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 TBC1D13Q9NVG8 400 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 PCDHA12Q9UN75 941 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 PPME1Q9Y570 386 aa21.7■■□□□ 1.06
ITGA4-202ENST00000339307 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.69■■□□□ 1.06
ITGA4-202ENST00000339307 C2orf71A6NGG8 1288 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 BTBD18B2RXH4 712 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 LOC730098B7Z3J9 87 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 ERLIN2O94905 339 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 CBX2Q14781 532 aaPredicted RBP21.69■■□□□ 1.06
ITGA4-202ENST00000339307 HFE2Q6ZVN8 426 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 SRGAP1Q7Z6B7 1085 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 AUTS2Q8WXX7 1259 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 CASP10Q92851 521 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 FAM193BQ96PV7 902 aaPredicted RBP21.69■■□□□ 1.06
ITGA4-202ENST00000339307 TRAIPQ9BWF2 469 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 NRDE2Q9H7Z3 1164 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 TSHZ2Q9NRE2 1034 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 AGPAT5Q9NUQ2 364 aa21.69■■□□□ 1.06
ITGA4-202ENST00000339307 JAK2O60674 1132 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 OFD1O75665 1012 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 ATP2B1P20020 1258 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 TXKP42681 527 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 TMEM184AQ6ZMB5 413 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 EDAQ92838 391 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 EIF2AK1Q9BQI3 630 aaKnown RBP21.68■■□□□ 1.06
ITGA4-202ENST00000339307 MINDY3Q9H8M7 445 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 HCFC2Q9Y5Z7 792 aa21.68■■□□□ 1.06
ITGA4-202ENST00000339307 ASAP2O43150 1006 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 GAS2O43903 313 aaKnown RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 CLASP2O75122 1294 aaKnown RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 ZNF623O75123 536 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 SLITRK3O94933 977 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 TPRNQ4KMQ1 711 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 CES5AQ6NT32 575 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 SYCE2Q6PIF2 218 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 ZBTB33Q86T24 672 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 FERMT3Q86UX7 667 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 TMEM173Q86WV6 379 aaPredicted RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 DIS3L2Q8IYB7 885 aaKnown RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 NSUN7Q8NE18 718 aaKnown RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 SUSD6Q92537 303 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 S1PR5Q9H228 398 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 TTC12Q9H892 705 aaPredicted RBP21.67■■□□□ 1.06
ITGA4-202ENST00000339307 DNAJB4Q9UDY4 337 aa21.67■■□□□ 1.06
ITGA4-202ENST00000339307 NEMFO60524 1076 aa21.66■■□□□ 1.06
ITGA4-202ENST00000339307 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
ITGA4-202ENST00000339307 GALTP07902 379 aa21.66■■□□□ 1.06
ITGA4-202ENST00000339307 HOXB8P17481 243 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms