RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 PSTPIP2Q9H939 334 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 LNPEPQ9UIQ6 1025 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 PCDHA12Q9UN75 941 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
PRKCD-201ENST00000330452 CEP104O60308 925 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 PFDN1O60925 122 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 ALOX15P16050 662 aaPredicted RBP18.47■□□□□ 0.55
PRKCD-201ENST00000330452 SLC15A2Q16348 729 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 APOBEC3HQ6NTF7 200 aaKnown RBP18.47■□□□□ 0.55
PRKCD-201ENST00000330452 NFRKBQ6P4R8 1299 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 CACNA2D4Q7Z3S7 1137 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 IQCDQ96DY2 449 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 DLGAP2Q9P1A6 1054 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 MYH10P35580 1976 aa18.47■□□□□ 0.55
PRKCD-201ENST00000330452 A8MUI8 341 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 NCK2O43639 380 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 FLOT1O75955 427 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 TAL1P17542 331 aaPredicted RBP18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PCK1P35558 622 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 MAGEA1P43355 309 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 USP46P62068 366 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PAK2Q13177 524 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 SEPT2Q15019 361 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PDXDC1Q6P996 788 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 RMDN2Q96LZ7 410 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PPP1R1BQ9UD71 204 aaPredicted RBP18.46■□□□□ 0.55
PRKCD-201ENST00000330452 KIAA1024Q9UPX6 916 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 ZBTB5O15062 677 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 ECE2O60344 883 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 MATR3P43243 847 aaKnown RBP eCLIP18.46■□□□□ 0.55
PRKCD-201ENST00000330452 RASSF7Q02833 373 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 FAM26FQ5R3K3 315 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 EXOC3L1Q86VI1 746 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 HOOK3Q86VS8 718 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 ATP11CQ8NB49 1132 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PCDH18Q9HCL0 1135 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PAIP2BQ9ULR5 123 aaKnown RBP18.46■□□□□ 0.55
PRKCD-201ENST00000330452 ABCB11O95342 1321 aa18.46■□□□□ 0.55
PRKCD-201ENST00000330452 PHF20L1A8MW92 1017 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 LCA5LO95447 670 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 KLC1Q07866 573 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 ZCWPW2Q504Y3 356 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 IQCEQ6IPM2 695 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 C16orf87Q6PH81 154 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 TMC4Q7Z404 712 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 RAPGEF5Q92565 580 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 OXCT2Q9BYC2 517 aaPredicted RBP18.46■□□□□ 0.54
PRKCD-201ENST00000330452 SWAP70Q9UH65 585 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 AGAP1Q9UPQ3 857 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 COL4A3BPQ9Y5P4 624 aa18.46■□□□□ 0.54
PRKCD-201ENST00000330452 BUB1O43683 1085 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 TMOD1P28289 359 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 SLC1A4P43007 532 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 SNAP25P60880 206 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 FKBP3Q00688 224 aaKnown RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 PLOD1Q02809 727 aaPredicted RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 TDRD12Q587J7 1177 aaKnown RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 PPP1R18Q6NYC8 613 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 NCCRP1Q6ZVX7 275 aaPredicted RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 CPLX4Q7Z7G2 160 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 LRRC27Q9C0I9 530 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 ADAM22Q9P0K1 906 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 POTEB3A0JP26 581 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 DDTLA6NHG4 134 aaPredicted RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 POTECB2RU33 542 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 IPO5O00410 1097 aaKnown RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 CCDC166P0CW27 439 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 ATP6V1C1P21283 382 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 DRD4P21917 467 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 STAT3P40763 770 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 CRKP46108 304 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 PHEXP78562 749 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 ASTE1Q2TB18 679 aaPredicted RBP18.45■□□□□ 0.54
PRKCD-201ENST00000330452 HGSNATQ68CP4 663 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 POTEBQ6S5H4 581 aa18.45■□□□□ 0.54
PRKCD-201ENST00000330452 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 SMC1BQ8NDV3 1235 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 TDRD3Q9H7E2 651 aaKnown RBP18.44■□□□□ 0.54
PRKCD-201ENST00000330452 MYH7BA7E2Y1 1941 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 TLR2O60603 784 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 RAD17O75943 681 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 NOL4O94818 638 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 KIAA0753Q2KHM9 967 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 SLC15A3Q8IY34 581 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 OGFOD1Q8N543 542 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 CCDC197Q8NCU1 140 aa18.44■□□□□ 0.54
PRKCD-201ENST00000330452 GDF11O95390 407 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 PLA2G4BP0C869 781 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 GSTT1P30711 240 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 SESN3P58005 492 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 CMPK2Q5EBM0 449 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
PRKCD-201ENST00000330452 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 LZICQ8WZA0 190 aa18.43■□□□□ 0.54
PRKCD-201ENST00000330452 LSM14BQ9BX40 385 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms