RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PMS2P54278 862 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 LBRQ14739 615 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KIAA1755Q5JYT7 1200 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 DDIASQ8IXT1 998 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 EAF2Q96CJ1 260 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MTBPQ96DY7 904 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RNF26Q9BY78 433 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GOLGA8TH3BQL2 631 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 IFNA8P32881 189 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 COPS2P61201 443 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ERICH1Q86X53 443 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GAS2L3Q86XJ1 694 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SSH3Q8TE77 659 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RNF139Q8WU17 664 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GRAMD1AQ96CP6 724 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 FAM161BQ96MY7 647 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 AP5M1Q9H0R1 490 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RPF1Q9H9Y2 349 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF804BA4D1E1 1349 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 VCAM1P19320 739 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SLC16A2P36021 539 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SLC9A5Q14940 896 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KRT31Q15323 416 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RESP18Q5W5W9 173 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 EXOC8Q8IYI6 725 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GCNAQ96QF7 691 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PRMT1Q99873 361 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ADD3Q9UEY8 706 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 BCS1LQ9Y276 419 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SRPRBQ9Y5M8 271 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 CDC42BPGQ6DT37 1551 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KRT16P08779 473 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ARL4CP56559 192 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 UNC5CLQ8IV45 518 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RHOT2Q8IXI1 618 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SLC26A7Q8TE54 656 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TUBGCP3Q96CW5 907 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ADNPQ9H2P0 1102 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 STRNO43815 780 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 FOSP01100 380 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 POU5F1BQ06416 359 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ACTN3Q08043 901 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KCTD2Q14681 263 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 CYTH1Q15438 398 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MTERF2Q49AM1 385 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF589Q86UQ0 364 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 LCORLQ8N3X6 602 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MB21D1Q8N884 522 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GANCQ8TET4 914 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 OTULINQ96BN8 352 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SENP1Q9P0U3 644 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TSC22D4Q9Y3Q8 395 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PLA2G4BP0C869 781 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ADRA2BP18089 450 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 VCPP55072 806 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PIGSQ96S52 555 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 VPS11Q9H270 941 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SEL1LQ9UBV2 794 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RSPH10B2B2RC85 870 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KRT14P02533 472 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 RSPH10BP0C881 870 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MARK3P27448 753 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 GFPT1Q06210 699 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TUBA3CQ13748 450 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 WDR75Q8IWA0 830 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF507Q8TCN5 953 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 AGR3Q8TD06 166 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ARL8AQ96BM9 186 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MSTO1Q9BUK6 570 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KLHL8Q9P2G9 620 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 HAUS5O94927 633 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 USP14P54578 494 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 NUP107P57740 925 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 NDUFA5Q16718 116 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TNIP2Q8NFZ5 429 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 FAM129AQ9BZQ8 928 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 MORC2Q9Y6X9 1032 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 KCNJ6P48051 423 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 NR5A1Q13285 461 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CEP55Q53EZ4 464 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 MOSPD1Q9UJG1 213 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 TTC7AQ9ULT0 858 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SYNDIG1LA6NDD5 238 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PSAPP07602 524 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 KRT7P08729 469 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CDC25AP30304 524 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SSTR3P32745 418 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 MDH1BQ5I0G3 518 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ZMYM1Q5SVZ6 1142 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 GPATCH4Q5T3I0 446 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ADCK1Q86TW2 530 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 TEKT4Q8WW24 435 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 BRD8Q9H0E9 1235 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms