RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 OGFOD1Q8N543 542 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 SLC17A8Q8NDX2 589 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 AGBL3Q8NEM8 1001 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 GINM1Q9NU53 330 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 ESYT3A0FGR9 886 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 ZNF233A6NK53 670 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 KRT13P13646 458 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 UBXN2AP68543 259 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 SLC20A2Q08357 652 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 ZNF784Q8NCA9 323 aaPredicted RBP27.17■■□□□ 1.94
ROM1-201ENST00000278833 CLEC4DQ8WXI8 215 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 IFT81Q8WYA0 676 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 CTNNBL1Q8WYA6 563 aaPredicted RBP27.17■■□□□ 1.94
ROM1-201ENST00000278833 ZBTB9Q96C00 473 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 LRRC45Q96CN5 670 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 ACCSQ96QU6 501 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 CARD9Q9H257 536 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 NMRK2Q9NPI5 230 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 PNMA2Q9UL42 364 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 PFASO15067 1338 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 ANKRD62A6NC57 917 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 SRRM3A6NNA2 597 aaPredicted RBP27.16■■□□□ 1.94
ROM1-201ENST00000278833 MYO1CO00159 1063 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 WDR46O15213 610 aaKnown RBP27.16■■□□□ 1.94
ROM1-201ENST00000278833 ZEB2O60315 1214 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 EXOC3O60645 756 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 DAAM2Q86T65 1068 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 KLHL7Q8IXQ5 586 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 RRAGCQ9HB90 399 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 AGO4Q9HCK5 861 aaKnown RBP27.16■■□□□ 1.94
ROM1-201ENST00000278833 CCPG1Q9ULG6 757 aa27.16■■□□□ 1.94
ROM1-201ENST00000278833 K7ENM7 598 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 DDX3YO15523 660 aaKnown RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 SART1O43290 800 aaKnown RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 TRIM49P0CI25 452 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 TRIM49CP0CI26 452 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 PLS3P13797 630 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 EPC2Q52LR7 807 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 GLYCTKQ8IVS8 523 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 RHOT2Q8IXI1 618 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 BANK1Q8NDB2 785 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 LPAR1Q92633 364 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 GPBP1L1Q9HC44 474 aaPredicted RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 KCNH7Q9NS40 1196 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 WDR90Q96KV7 1748 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 BUB1BO60566 1050 aaPredicted RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 RPS12P25398 132 aaKnown RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 RARRES1P49788 294 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 IRX5P78411 483 aaPredicted RBP27.15■■□□□ 1.94
ROM1-201ENST00000278833 SPDYCQ5MJ68 293 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 FOXR1Q6PIV2 292 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 MAATS1Q7Z4T9 603 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 KSR1Q8IVT5 923 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 SYCP3Q8IZU3 236 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 CCDC26Q8TAB7 109 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 SLC35G2Q8TBE7 412 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 IWS1Q96ST2 819 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 GOLPH3Q9H4A6 298 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 FBXO28Q9NVF7 368 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 GPRC5DQ9NZD1 345 aa27.15■■□□□ 1.94
ROM1-201ENST00000278833 TMCO5BA8MYB1 307 aa27.14■■□□□ 1.94
ROM1-201ENST00000278833 HMGB1P1B2RPK0 211 aaPredicted RBP27.14■■□□□ 1.94
ROM1-201ENST00000278833 GTF2BQ00403 316 aa27.14■■□□□ 1.94
ROM1-201ENST00000278833 POU5F1Q01860 360 aaKnown RBP27.14■■□□□ 1.94
ROM1-201ENST00000278833 CETN1Q12798 172 aa27.14■■□□□ 1.94
ROM1-201ENST00000278833 NAP1L3Q99457 506 aaPredicted RBP27.14■■□□□ 1.94
ROM1-201ENST00000278833 COL20A1Q9P218 1284 aa27.14■■□□□ 1.94
ROM1-201ENST00000278833 KRIT1O00522 736 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 TNFAIP3P21580 790 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 PLS1Q14651 629 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 TKFCQ3LXA3 575 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 PHLDB3Q6NSJ2 640 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 C11orf63Q6NUN7 778 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 HVCN1Q96D96 273 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 FAM107BQ9H098 131 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 TBC1D22BQ9NU19 505 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 CNOT7Q9UIV1 285 aaKnown RBP27.13■■□□□ 1.93
ROM1-201ENST00000278833 ZHX2Q9Y6X8 837 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 QARSP47897 775 aaKnown RBP27.13■■□□□ 1.93
ROM1-201ENST00000278833 MTMR3Q13615 1198 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 PRPF38AQ8NAV1 312 aaKnown RBP27.13■■□□□ 1.93
ROM1-201ENST00000278833 AGPAT1Q99943 283 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 FAM114A2Q9NRY5 505 aa27.13■■□□□ 1.93
ROM1-201ENST00000278833 FEZ2Q9UHY8 353 aaPredicted RBP27.13■■□□□ 1.93
ROM1-201ENST00000278833 VAMP7P51809 220 aa27.12■■□□□ 1.93
ROM1-201ENST00000278833 C4orf19Q8IY42 314 aa27.12■■□□□ 1.93
ROM1-201ENST00000278833 ATP6V1G3Q96LB4 118 aa27.12■■□□□ 1.93
ROM1-201ENST00000278833 IGSF9BQ9UPX0 1349 aa27.12■■□□□ 1.93
ROM1-201ENST00000278833 PARP14Q460N5 1801 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 MTA2O94776 668 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 NCKAP1LP55160 1127 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 ENPEPQ07075 957 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 ITGB3BPQ13352 177 aaPredicted RBP27.11■■□□□ 1.93
ROM1-201ENST00000278833 DNAJC21Q5F1R6 531 aaKnown RBP27.11■■□□□ 1.93
ROM1-201ENST00000278833 MICALL2Q8IY33 904 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 TMEM39BQ9GZU3 492 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 HACL1Q9UJ83 578 aa27.11■■□□□ 1.93
ROM1-201ENST00000278833 INPP5BP32019 993 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 GUCY2FP51841 1108 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 RNASE9P60153 205 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms