RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 KCNH2Q12809 1159 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 M0QYV0 167 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 PSMC5P62195 406 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 SLC44A5Q8NCS7 719 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 SRP68Q9UHB9 627 aaKnown RBP17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ADCY3O60266 1144 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 FTLP02792 175 aaPredicted RBP17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ZNF341Q9BYN7 854 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 SIK2Q9H0K1 926 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 NEUROG2Q9H2A3 272 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 UNC45AQ9H3U1 944 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 NDE1Q9NXR1 346 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEFA5A3E0 1075 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 CHUKO15111 745 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEIP0CG38 1075 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 POTEEQ6S8J3 1075 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 NPHS2Q9NP85 383 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ATP10BO94823 1461 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 FCER1AP12319 257 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 COPB2P35606 906 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 CUL4AQ13619 759 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ASXL2Q76L83 1435 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 GALNT4Q8N4A0 578 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 LZICQ8WZA0 190 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 TMA16Q96EY4 203 aaKnown RBP17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 RAVER2Q9HCJ3 691 aaKnown RBP17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 SERPINB13Q9UIV8 391 aa17.88■□□□□ 0.45
TSPAN3-201ENST00000267970 DFFAO00273 331 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 ARL13BQ3SXY8 428 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 KIF2BQ8N4N8 673 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 AFG1LQ8WV93 481 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 WDR24Q96S15 920 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 KLC4Q9NSK0 619 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 GIMAP4Q9NUV9 329 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 NR3C1P04150 777 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 TRPC1P48995 793 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 DEUP1Q05D60 604 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 INPP5DQ92835 1189 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 XDHP47989 1333 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 E5RI56 91 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 LMNAP02545 664 aaKnown RBP17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 TRIM49P0CI25 452 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 TRIM49CP0CI26 452 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 GPC5P78333 572 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 LONRF1Q17RB8 773 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 FSCBQ5H9T9 825 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 AARSP49588 968 aaKnown RBP eCLIP17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 RASGRF1Q13972 1273 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 ULK4Q96C45 1275 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 LRRC1Q9BTT6 524 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 NDFIP2Q9NV92 336 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 UBE4BO95155 1302 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 TAS2R42Q7RTR8 314 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 WDR48Q8TAF3 677 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 PCDHA6Q9UN73 950 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 PCDHA8Q9Y5H6 950 aa17.87■□□□□ 0.45
TSPAN3-201ENST00000267970 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 PHF20L1A8MW92 1017 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 NBNO60934 754 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 DGKIO75912 1065 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 OCM2P0CE71 109 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 OCMP0CE72 109 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 LCP1P13796 627 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 SIK1P57059 783 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 COASYQ13057 564 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 CAPRIN2Q6IMN6 1127 aaKnown RBP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 CCDC137Q6PK04 289 aaKnown RBP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 SNRNP27Q8WVK2 155 aaKnown RBP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 AGAP3Q96P47 875 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 ZNF699Q32M78 642 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 ACCSLQ4AC99 568 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 FAM83BQ5T0W9 1011 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 COPRSQ9NQ92 184 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 RNF14Q9UBS8 474 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 STK25O00506 426 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 PODXLO00592 558 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 SASH1O94885 1247 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 PAMP19021 973 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 PRPF4O43172 522 aaKnown RBP eCLIP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 LONP2Q86WA8 852 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 TRIM51Q9BSJ1 452 aa17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 DRAP1Q14919 205 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-201ENST00000267970 DHX38Q92620 1227 aaKnown RBP17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 CEP72Q9P209 647 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 MYOM2P54296 1465 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 SLC30A5Q8TAD4 765 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 DPF2Q92785 391 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 PNMA2Q9UL42 364 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 TSC22D4Q9Y3Q8 395 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 DAB1O75553 588 aa17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 UBTFL6P0CB48 400 aaPredicted RBP17.85■□□□□ 0.45
TSPAN3-201ENST00000267970 VSNL1P62760 191 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms