RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 C7orf43Q8WVR3 580 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RXFP1Q9HBX9 757 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 PPP1R9AQ9ULJ8 1098 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 FOCADQ5VW36 1801 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RASGRF2O14827 1237 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RIMBP2O15034 1052 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 CTCFP49711 727 aaPredicted RBP19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RAB27AP51159 221 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 MAPK7Q13164 816 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 MGARPQ8TDB4 240 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 RAB34Q9BZG1 259 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 OSGEPQ9NPF4 335 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 PCDHA2Q9Y5H9 948 aa19.08■□□□□ 0.64
CDKN1B-201ENST00000228872 KLRF2D3W0D1 207 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 FGFR4P22455 802 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 GALCP54803 685 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 PDIA5Q14554 519 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 SPATA21Q7Z572 469 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 EXOC3L1Q86VI1 746 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 VPS36Q86VN1 386 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 NAP1L3Q99457 506 aaPredicted RBP19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 LZTS2Q9BRK4 669 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 RASAL2Q9UJF2 1139 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 SUGT1Q9Y2Z0 365 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 TDP2O95551 362 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 NEFHP12036 1026 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 PON1P27169 355 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 MFSD14BQ5SR56 506 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 MAEAQ7L5Y9 396 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 REXO1Q8N1G1 1221 aaKnown RBP19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 PLCD4Q9BRC7 762 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 SPZ1Q9BXG8 430 aa19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 CPSF2Q9P2I0 782 aaKnown RBP19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 AJAP1Q9UKB5 411 aaPredicted RBP19.07■□□□□ 0.64
CDKN1B-201ENST00000228872 RIPK2O43353 540 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 UPP2O95045 317 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 CCNB1P14635 433 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 PTGIRP43119 386 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 NUGGCQ68CJ6 796 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 CC2D2BQ6DHV5 1058 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 MFSD5Q6N075 450 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 SLC30A9Q6PML9 568 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 SCFD1Q8WVM8 642 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 DYNLL2Q96FJ2 89 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 CARD9Q9H257 536 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 DDX60LQ5H9U9 1706 aaKnown RBP19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 DPPA5A6NC42 116 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 CETN3O15182 167 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 BAG3O95817 575 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 GNAZP19086 355 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 RPL21P46778 160 aaKnown RBP19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 ZNF211Q13398 564 aaPredicted RBP19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 EXOC3L4Q17RC7 722 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 TRIM68Q6AZZ1 485 aa19.06■□□□□ 0.64
CDKN1B-201ENST00000228872 NCANO14594 1321 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 C12orf60Q5U649 245 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 ANO7Q6IWH7 933 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 SLF2Q8IX21 1173 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 RMDN2Q96LZ7 410 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 TMEM47Q9BQJ4 181 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 NKX1-2Q9UD57 310 aaPredicted RBP19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 MTRF1LQ9UGC7 380 aaKnown RBP19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 LRRC42Q9Y546 428 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 HIP1RO75146 1068 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 AFPP02771 609 aaKnown RBP19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 FERP16591 822 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 GTF2IP78347 998 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 PPATQ06203 517 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 SLC35G2Q8TBE7 412 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 TRIM7Q9C029 511 aa19.05■□□□□ 0.64
CDKN1B-201ENST00000228872 TMEM120BA0PK00 339 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 MPHOSPH10O00566 681 aaKnown RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 EDIL3O43854 480 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 KRT13P13646 458 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 SKIV2L2P42285 1042 aaKnown RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 JAM2P57087 298 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 EDRF1Q3B7T1 1238 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 CCDC65Q8IXS2 484 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 LNX1Q8TBB1 728 aaPredicted RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 RFFLQ8WZ73 363 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 UTP4Q969X6 686 aaKnown RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 BMP2KQ9NSY1 1161 aaPredicted RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 GAKO14976 1311 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 NR2F2P24468 414 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 CWF19L1Q69YN2 538 aaKnown RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 RAB3IPQ96QF0 476 aaPredicted RBP19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 TSC22D3Q99576 134 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 SIX2Q9NPC8 291 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 EMILIN3Q9NT22 766 aa19.04■□□□□ 0.64
CDKN1B-201ENST00000228872 IGSF9BQ9UPX0 1349 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 GPR75-ASB3A0A0A6YYF3 556 aa19.03■□□□□ 0.64
CDKN1B-201ENST00000228872 GBP1P32455 592 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms