RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 MAP2K2P36507 400 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
NOD1-201ENST00000222823 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
NOD1-201ENST00000222823 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
NOD1-201ENST00000222823 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 PHKA2P46019 1235 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 SEPT6Q14141 434 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 EPHA7Q15375 998 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 HAUS6Q7Z4H7 955 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 MYLK4Q86YV6 388 aaPredicted RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 GINM1Q9NU53 330 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 SERPINB6P35237 376 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ITPK1Q13572 414 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 SEC23AQ15436 765 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ATP6V1E2Q96A05 226 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 ZNF302Q9NR11 478 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 BAG5Q9UL15 447 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 WDR91A4D1P6 747 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 XPAP23025 273 aaPredicted RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 THOC5Q13769 683 aaKnown RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 MTF1Q14872 753 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 GLYCTKQ8IVS8 523 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 HSPH1Q92598 858 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 SAAL1Q96ER3 474 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 OSBPL9Q96SU4 736 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 BCL9O00512 1426 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 EYA4O95677 639 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 EP400NLQ6ZTU2 488 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 MTRQ99707 1265 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 PLAAQ9Y263 795 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 FNDC3AQ9Y2H6 1198 aaKnown RBP12.31□□□□□ -0.44
NOD1-201ENST00000222823 RIC1Q4ADV7 1423 aa12.31□□□□□ -0.44
NOD1-201ENST00000222823 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 SNCBQ16143 134 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 GBP5Q96PP8 586 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 USH1CQ9Y6N9 552 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 FLT1P17948 1338 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 CALB1P05937 261 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 RFX1P22670 979 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 ZNF211Q13398 564 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 TRIM56Q9BRZ2 755 aaKnown RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 CAPN11Q9UMQ6 739 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 SPATA31A1Q5TZJ5 1347 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 A0A087WUV0 522 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 GOLGA8QA0A0J9YX86 632 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 GOLGA8OA6NCC3 632 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 GOLGA8NF8WBI6 632 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 PDXKO00764 312 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 NDUFB10O96000 172 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 SLC4A1P02730 911 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 TBXAS1P24557 533 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 STX1BP61266 288 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 GDAP1Q8TB36 358 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 ZNF564Q8TBZ8 553 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
NOD1-201ENST00000222823 SAYSD1Q9NPB0 183 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
NOD1-201ENST00000222823 WDR46O15213 610 aaKnown RBP12.29□□□□□ -0.44
NOD1-201ENST00000222823 TOM1L1O75674 476 aa12.29□□□□□ -0.44
NOD1-201ENST00000222823 KRT37O76014 449 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms