RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tlr11Q6R5P0 926 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Tspan8Q8R3G9 235 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Taf1Q80UV9 1891 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Trpm7Q923J1 1863 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 RbsnQ80Y56 783 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gfpt2Q9Z2Z9 682 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Skor2A7M7C7 1008 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ildr2B5TVM2 661 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 DtnbO70585 659 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ccdc57Q6PHN1 1016 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Slc9a9Q8BZ00 644 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Tnpo2Q99LG2 887 aaKnown RBP17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Il2rbP16297 539 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Atoh1P48985 351 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Anp32eP97822 260 aaKnown RBP17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Krt15Q61414 452 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Bola2Q8BGS2 86 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Il17cQ8K4C5 194 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Wrap53Q8VC51 532 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Bzw2Q91VK1 419 aaKnown RBP17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Tas1r3Q925D8 858 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Drap1Q9D6N5 205 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ggps1Q9WTN0 300 aa17.22■□□□□ 0.35
Trim39-203ENSMUST00000113706 Vmn2r63E9Q0K5 859 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gm9268E9Q0M3 861 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Vmn2r62K7N712 859 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Nptx2O70340 429 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Tubb5P99024 444 aaKnown RBP17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Trim43aQ3TL54 445 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 NfrkbQ6PIJ4 1296 aaKnown RBP17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Usp15Q8R5H1 981 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 NptxrQ99J85 493 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Spata17Q9D552 379 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Slc3a2P10852 526 aaKnown RBP17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Adamts18Q4VC17 1219 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ano5Q75UR0 904 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Usp37Q8C0R0 979 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Mettl1Q9Z120 268 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Mtmr1Q9Z2C4 669 aa17.21■□□□□ 0.35
Trim39-203ENSMUST00000113706 Btbd18A0A0A6YY25 723 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 P01734 135 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tcp1P11983 556 aaKnown RBP17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Lta4hP24527 611 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pou2f2Q00196 463 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Serpina1eQ00898 413 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ecm1Q61508 559 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Lrig3Q6P1C6 1117 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 BrdtQ91Y44 956 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 Cbx8Q9QXV1 362 aa17.21■□□□□ 0.34
Trim39-203ENSMUST00000113706 SrcapA0A087WQ44 3271 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gm3414Q3TNU4 584 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ddr2Q62371 854 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Plppr4Q7TME0 766 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tmem117Q8BH18 514 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 3830417A13RikQ8BQJ2 303 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ccdc169Q8BXX9 214 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Kif2bQ8C0N1 668 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Stoml1Q8CI66 399 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Mmgt1Q8K273 131 aaKnown RBP17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Luc7lQ9CYI4 371 aaKnown RBP17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tcp10bE9PYJ0 438 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Cd37Q61470 281 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ctu1Q99J10 420 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Vwa5aQ99KC8 793 aaKnown RBP17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 EmcnQ9R0H2 261 aa17.2■□□□□ 0.34
Trim39-203ENSMUST00000113706 Guca2bO09051 106 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 rp9P97762 213 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Atp8b1Q148W0 1251 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 PorcnQ9JJJ7 461 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Olig1Q9JKN5 260 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Taf4bG5E8Z2 855 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Rtel1Q0VGM9 1203 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 ItgaeQ60677 1167 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Zc3h6Q8BYK8 1177 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Acot11Q8VHQ9 594 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 PrameQ9D4Z5 464 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Cdc42ep4Q9JM96 349 aaKnown RBP17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gucy1b3O54865 620 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gna15P30678 374 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gm1587Q3UT80 123 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Btg1-ps1Q3V0S2 161 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Btg1-ps2Q3V0X0 161 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Wdr18Q4VBE8 431 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 FdxrQ61578 494 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ddx3xQ62167 662 aaKnown RBP17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Slc13a4Q8BZ82 625 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Parp10Q8CIE4 960 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ino80bQ99PT3 375 aaKnown RBP17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ergic2Q9CR89 377 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Serpina9Q9D7D2 418 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Znf354bQ9QXT9 601 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Btbd19S4R1I0 287 aa17.19■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gm28919A0A087WP35 240 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Nek5Q7TSC3 627 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pop1Q8K205 1045 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Itm2cQ91VK4 269 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gm4841E9QAA8 417 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 4930544D05RikJ3QK56 214 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Map2k1P31938 393 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Sh2d1b2Q45HK4 132 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 113.3 ms