RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YDR061WQ12298 539 aa2.28□□□□□ -2.04
SNX41YDR425W MED4Q12343 284 aa2.28□□□□□ -2.04
SNX41YDR425W ATP14Q12349 124 aa2.28□□□□□ -2.04
SNX41YDR425W TRM10Q12400 293 aa2.28□□□□□ -2.04
SNX41YDR425W TIM9O74700 87 aa2.28□□□□□ -2.04
SNX41YDR425W HEM2P05373 342 aa2.28□□□□□ -2.04
SNX41YDR425W RPS3P05750 240 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W RAD52P06778 471 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W DSF1P0CX08 502 aa2.28□□□□□ -2.04
SNX41YDR425W YNR073CP0CX09 502 aa2.28□□□□□ -2.04
SNX41YDR425W RPL20AP0CX23 172 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W RPL20BP0CX24 172 aaPredicted RBP2.28□□□□□ -2.04
SNX41YDR425W GCY1P14065 312 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SNX41YDR425W ART10P18634 518 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W CDC42P19073 191 aa2.28□□□□□ -2.04
SNX41YDR425W CNB1P25296 175 aa2.28□□□□□ -2.04
SNX41YDR425W RNA14P25298 677 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W NTG1P31378 399 aa2.28□□□□□ -2.04
SNX41YDR425W APE2P32454 952 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W UTR4P32626 227 aa2.28□□□□□ -2.04
SNX41YDR425W YSC83P32792 385 aa2.28□□□□□ -2.04
SNX41YDR425W PMU1P36069 295 aa2.28□□□□□ -2.04
SNX41YDR425W KEL1P38853 1164 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W MLH1P38920 769 aa2.28□□□□□ -2.04
SNX41YDR425W SOP4P39543 234 aaPredicted RBP2.28□□□□□ -2.04
SNX41YDR425W SOK1P40317 901 aa2.28□□□□□ -2.04
SNX41YDR425W YPI1P43587 155 aa2.28□□□□□ -2.04
SNX41YDR425W YPT32P51996 222 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W MRH4P53166 561 aa2.28□□□□□ -2.04
SNX41YDR425W DUO1P53168 247 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W ELP3Q02908 557 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W RLI1Q03195 608 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W YMR010WQ03687 405 aa2.28□□□□□ -2.04
SNX41YDR425W ENT5Q03769 411 aaKnown RBP2.28□□□□□ -2.04
SNX41YDR425W PEX12Q04370 399 aa2.28□□□□□ -2.04
SNX41YDR425W MFB1Q04922 465 aa2.28□□□□□ -2.04
SNX41YDR425W CUR1Q06469 252 aa2.28□□□□□ -2.04
SNX41YDR425W YEH1Q07804 573 aa2.28□□□□□ -2.04
SNX41YDR425W SYC1Q08553 188 aaPredicted RBP2.28□□□□□ -2.04
SNX41YDR425W NSL1Q12143 216 aa2.28□□□□□ -2.04
SNX41YDR425W YGK3Q12222 375 aaPredicted RBP2.28□□□□□ -2.04
SNX41YDR425W RBD2Q12270 262 aa2.28□□□□□ -2.04
SNX41YDR425W YOR012WQ12351 137 aa2.28□□□□□ -2.04
SNX41YDR425W RPN6Q12377 434 aa2.28□□□□□ -2.04
SNX41YDR425W YPL119C-AQ3E751 87 aa2.28□□□□□ -2.04
SNX41YDR425W YHR213W-AQ8TGT4 77 aa2.28□□□□□ -2.04
SNX41YDR425W YBR126W-AQ8TGU7 68 aa2.28□□□□□ -2.04
SNX41YDR425W AI5_BETAQ9ZZX0 354 aa2.28□□□□□ -2.04
SNX41YDR425W FKS3Q04952 1785 aa2.27□□□□□ -2.05
SNX41YDR425W GPH1P06738 902 aaKnown RBP2.27□□□□□ -2.05
SNX41YDR425W RAD7P06779 565 aa2.27□□□□□ -2.05
SNX41YDR425W KRE2P27809 442 aa2.27□□□□□ -2.05
SNX41YDR425W HYM1P32464 399 aa2.27□□□□□ -2.05
SNX41YDR425W PAH1P32567 862 aa2.27□□□□□ -2.05
SNX41YDR425W FRE1P32791 686 aa2.27□□□□□ -2.05
SNX41YDR425W ZRT3P34240 503 aa2.27□□□□□ -2.05
SNX41YDR425W YBR056WP38081 501 aa2.27□□□□□ -2.05
SNX41YDR425W CST26P38226 397 aa2.27□□□□□ -2.05
SNX41YDR425W OTU2P38747 307 aaKnown RBP2.27□□□□□ -2.05
SNX41YDR425W RRP4P38792 359 aaKnown RBP2.27□□□□□ -2.05
SNX41YDR425W NDE1P40215 560 aa2.27□□□□□ -2.05
SNX41YDR425W SPG5P42933 373 aa2.27□□□□□ -2.05
SNX41YDR425W COS4P43542 379 aa2.27□□□□□ -2.05
SNX41YDR425W SNZ3P43545 298 aa2.27□□□□□ -2.05
SNX41YDR425W ALK1P43633 760 aaKnown RBP2.27□□□□□ -2.05
SNX41YDR425W BUD13P46947 266 aaPredicted RBP2.27□□□□□ -2.05
SNX41YDR425W AIF1P52923 378 aa2.27□□□□□ -2.05
SNX41YDR425W LSB1P53281 241 aa2.27□□□□□ -2.05
SNX41YDR425W SNZ2P53824 298 aa2.27□□□□□ -2.05
SNX41YDR425W NUP49Q02199 472 aa2.27□□□□□ -2.05
SNX41YDR425W BNA7Q04066 261 aa2.27□□□□□ -2.05
SNX41YDR425W BCH1Q05029 724 aa2.27□□□□□ -2.05
SNX41YDR425W MRPL51Q06090 140 aaPredicted RBP2.27□□□□□ -2.05
SNX41YDR425W GPI11Q06636 219 aa2.27□□□□□ -2.05
SNX41YDR425W DIS3Q08162 1001 aaKnown RBP2.27□□□□□ -2.05
SNX41YDR425W PFK27Q12471 397 aaPredicted RBP2.27□□□□□ -2.05
SNX41YDR425W YOL159C-AQ3E769 90 aa2.27□□□□□ -2.05
SNX41YDR425W CBP2P03874 630 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W ARG3P05150 338 aa2.26□□□□□ -2.05
SNX41YDR425W ATP1P07251 545 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W SEC53P07283 254 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W ELO2P25358 347 aa2.26□□□□□ -2.05
SNX41YDR425W RHB1P25378 209 aa2.26□□□□□ -2.05
SNX41YDR425W YCL068CP25593 260 aa2.26□□□□□ -2.05
SNX41YDR425W CIN8P27895 1000 aa2.26□□□□□ -2.05
SNX41YDR425W CAM1P29547 415 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W YBL010CP32788 280 aa2.26□□□□□ -2.05
SNX41YDR425W SDH3P33421 198 aa2.26□□□□□ -2.05
SNX41YDR425W YHR131CP38835 850 aa2.26□□□□□ -2.05
SNX41YDR425W NPR2P39923 615 aa2.26□□□□□ -2.05
SNX41YDR425W SSO2P39926 295 aa2.26□□□□□ -2.05
SNX41YDR425W YER184CP39961 794 aa2.26□□□□□ -2.05
SNX41YDR425W HAT2P39984 401 aa2.26□□□□□ -2.05
SNX41YDR425W NOP16P40007 231 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W AZR1P50080 613 aa2.26□□□□□ -2.05
SNX41YDR425W MSO1P53604 210 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W COS1P53822 381 aa2.26□□□□□ -2.05
SNX41YDR425W LSM3P57743 89 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W TOF2Q02208 771 aa2.26□□□□□ -2.05
SNX41YDR425W PET117Q02771 107 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 1141.2 ms