RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C IRC4Q03036 179 aa3.38□□□□□ -1.87
SHU2YDR078C KAP95Q06142 861 aaKnown RBP3.38□□□□□ -1.87
SHU2YDR078C FMP16Q12497 93 aa3.38□□□□□ -1.87
SHU2YDR078C RVS161P25343 265 aaKnown RBP3.37□□□□□ -1.87
SHU2YDR078C YHR035WP38769 630 aa3.37□□□□□ -1.87
SHU2YDR078C GAB1P41733 394 aa3.37□□□□□ -1.87
SHU2YDR078C GIS2P53849 153 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SHU2YDR078C GAS2Q06135 555 aa3.37□□□□□ -1.87
SHU2YDR078C PBP4Q07362 185 aaKnown RBP3.37□□□□□ -1.87
SHU2YDR078C YLR012CQ07927 99 aa3.37□□□□□ -1.87
SHU2YDR078C TAF10Q12030 206 aa3.37□□□□□ -1.87
SHU2YDR078C APC9Q12107 265 aa3.37□□□□□ -1.87
SHU2YDR078C REP1P03871 373 aa3.36□□□□□ -1.87
SHU2YDR078C RPS14AP06367 137 aaKnown RBP3.36□□□□□ -1.87
SHU2YDR078C STE7P06784 515 aa3.36□□□□□ -1.87
SHU2YDR078C UNG1P12887 359 aa3.36□□□□□ -1.87
SHU2YDR078C CTA1P15202 515 aa3.36□□□□□ -1.87
SHU2YDR078C CDC50P25656 391 aa3.36□□□□□ -1.87
SHU2YDR078C NUP2P32499 720 aa3.36□□□□□ -1.87
SHU2YDR078C ZRT1P32804 376 aa3.36□□□□□ -1.87
SHU2YDR078C MRPL37P36532 105 aa3.36□□□□□ -1.87
SHU2YDR078C CTM1P38818 585 aa3.36□□□□□ -1.87
SHU2YDR078C TIM17P39515 158 aa3.36□□□□□ -1.87
SHU2YDR078C RPS14BP39516 138 aaKnown RBP3.36□□□□□ -1.87
SHU2YDR078C PMT4P46971 762 aa3.36□□□□□ -1.87
SHU2YDR078C EMC2P47133 292 aaKnown RBP3.36□□□□□ -1.87
SHU2YDR078C SLT2Q00772 484 aa3.36□□□□□ -1.87
SHU2YDR078C RDL2Q08742 149 aaKnown RBP3.36□□□□□ -1.87
SHU2YDR078C YPQ1Q12010 308 aa3.36□□□□□ -1.87
SHU2YDR078C RBD2Q12270 262 aa3.36□□□□□ -1.87
SHU2YDR078C CSM1P25651 190 aa3.35□□□□□ -1.87
SHU2YDR078C DEP1P31385 405 aa3.35□□□□□ -1.87
SHU2YDR078C COS9P36034 407 aa3.35□□□□□ -1.87
SHU2YDR078C OM14P38325 134 aa3.35□□□□□ -1.87
SHU2YDR078C PFS1P38872 237 aa3.35□□□□□ -1.87
SHU2YDR078C PET100P38958 111 aa3.35□□□□□ -1.87
SHU2YDR078C KEL2P50090 882 aa3.35□□□□□ -1.87
SHU2YDR078C YGR266WP53326 701 aa3.35□□□□□ -1.87
SHU2YDR078C ENT5Q03769 411 aaKnown RBP3.35□□□□□ -1.87
SHU2YDR078C CSI1Q04368 295 aa3.35□□□□□ -1.87
SHU2YDR078C WTM1Q12363 437 aaKnown RBP3.35□□□□□ -1.87
SHU2YDR078C PRP46Q12417 451 aaPredicted RBP3.35□□□□□ -1.87
SHU2YDR078C PRB1P09232 635 aa3.34□□□□□ -1.87
SHU2YDR078C FRS2P15625 503 aaKnown RBP3.34□□□□□ -1.87
SHU2YDR078C ZRC1P20107 442 aa3.34□□□□□ -1.87
SHU2YDR078C ICL1P28240 557 aaPredicted RBP3.34□□□□□ -1.87
SHU2YDR078C PDC2P32896 925 aa3.34□□□□□ -1.87
SHU2YDR078C SWD2P36104 329 aaPredicted RBP3.34□□□□□ -1.87
SHU2YDR078C HIS2P38635 335 aa3.34□□□□□ -1.87
SHU2YDR078C CHL4P38907 458 aa3.34□□□□□ -1.87
SHU2YDR078C FMP33P46998 180 aa3.34□□□□□ -1.87
SHU2YDR078C SEH1P53011 349 aaKnown RBP3.34□□□□□ -1.87
SHU2YDR078C MPP6P53725 186 aaPredicted RBP3.34□□□□□ -1.87
SHU2YDR078C SCS7Q03529 384 aa3.34□□□□□ -1.87
SHU2YDR078C FAR10Q06001 478 aa3.34□□□□□ -1.87
SHU2YDR078C YLR177WQ06251 628 aa3.34□□□□□ -1.87
SHU2YDR078C RRT8Q08219 342 aa3.34□□□□□ -1.87
SHU2YDR078C PRM4Q12498 284 aa3.34□□□□□ -1.87
SHU2YDR078C ATP6P00854 259 aa3.33□□□□□ -1.88
SHU2YDR078C SPS100P13130 326 aa3.33□□□□□ -1.88
SHU2YDR078C CMK2P22517 447 aa3.33□□□□□ -1.88
SHU2YDR078C URA10P30402 227 aa3.33□□□□□ -1.88
SHU2YDR078C SPR1P32603 445 aa3.33□□□□□ -1.88
SHU2YDR078C YUH1P35127 236 aa3.33□□□□□ -1.88
SHU2YDR078C SOL2P37262 315 aa3.33□□□□□ -1.88
SHU2YDR078C RCY1P39531 840 aa3.33□□□□□ -1.88
SHU2YDR078C PEX22P39718 180 aa3.33□□□□□ -1.88
SHU2YDR078C SLM1P40485 686 aa3.33□□□□□ -1.88
SHU2YDR078C YJR054WP47114 497 aa3.33□□□□□ -1.88
SHU2YDR078C CDH1P53197 566 aa3.33□□□□□ -1.88
SHU2YDR078C SED5Q01590 340 aa3.33□□□□□ -1.88
SHU2YDR078C RRN5Q02983 363 aa3.33□□□□□ -1.88
SHU2YDR078C SNX41Q04053 625 aa3.33□□□□□ -1.88
SHU2YDR078C LIP2Q06005 328 aa3.33□□□□□ -1.88
SHU2YDR078C BER1Q06688 274 aaKnown RBP3.33□□□□□ -1.88
SHU2YDR078C YLL007CQ07799 665 aa3.33□□□□□ -1.88
SHU2YDR078C RPN8Q08723 338 aaKnown RBP3.33□□□□□ -1.88
SHU2YDR078C RSA1Q08932 381 aa3.33□□□□□ -1.88
SHU2YDR078C IZH4Q99393 312 aa3.33□□□□□ -1.88
SHU2YDR078C HPR1P17629 752 aaKnown RBP3.32□□□□□ -1.88
SHU2YDR078C KTI12P34253 313 aaKnown RBP3.32□□□□□ -1.88
SHU2YDR078C TPO5P36029 618 aa3.32□□□□□ -1.88
SHU2YDR078C SHE1P38200 338 aa3.32□□□□□ -1.88
SHU2YDR078C SCC4P40090 624 aa3.32□□□□□ -1.88
SHU2YDR078C AGP3P43548 558 aa3.32□□□□□ -1.88
SHU2YDR078C SWC4P53201 476 aa3.32□□□□□ -1.88
SHU2YDR078C YGR015CP53208 328 aa3.32□□□□□ -1.88
SHU2YDR078C SPP2Q02521 185 aa3.32□□□□□ -1.88
SHU2YDR078C MRX9Q07349 420 aaKnown RBP3.32□□□□□ -1.88
SHU2YDR078C DTD1Q07648 150 aaKnown RBP3.32□□□□□ -1.88
SHU2YDR078C RPL24AP04449 155 aaKnown RBP3.31□□□□□ -1.88
SHU2YDR078C RPL31AP0C2H8 113 aaKnown RBP3.31□□□□□ -1.88
SHU2YDR078C YEL045CP32616 141 aa3.31□□□□□ -1.88
SHU2YDR078C GCG1P32656 232 aaKnown RBP3.31□□□□□ -1.88
SHU2YDR078C MCH2P36032 473 aa3.31□□□□□ -1.88
SHU2YDR078C YKL071WP36086 256 aa3.31□□□□□ -1.88
SHU2YDR078C BMT2P38278 337 aa3.31□□□□□ -1.88
SHU2YDR078C WSC4P38739 605 aa3.31□□□□□ -1.88
SHU2YDR078C SMC2P38989 1170 aaKnown RBP3.31□□□□□ -1.88
SHU2YDR078C BIO3P50277 480 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms