RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 KCNJ6P48051 423 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 MTMR1Q13613 665 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 PGM5Q15124 567 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 ISM2Q6H9L7 571 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 KCNV1Q6PIU1 500 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 VSIG10LQ86VR7 867 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 RETREG2Q8NC44 543 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 TBC1D5Q92609 795 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 TGS1Q96RS0 853 aaKnown RBP19.01■□□□□ 0.63
PHGDH-234ENST00000642041 PRRX2Q99811 253 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 HSD17B14Q9BPX1 270 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 BLZF1Q9H2G9 400 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 FANCLQ9NW38 375 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 SEL1LQ9UBV2 794 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 FAM50BQ9Y247 325 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 CACNA1HO95180 2353 aa19.01■□□□□ 0.63
PHGDH-234ENST00000642041 LYPLA2O95372 231 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 KRT18P05783 430 aaKnown RBP19■□□□□ 0.63
PHGDH-234ENST00000642041 PTGS1P23219 599 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 ABCD1P33897 745 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 CATSPER3Q86XQ3 398 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
PHGDH-234ENST00000642041 DDX12PQ92771 950 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 SENP7Q9BQF6 1050 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 EIF2AK1Q9BQI3 630 aaKnown RBP19■□□□□ 0.63
PHGDH-234ENST00000642041 ZBED2Q9BTP6 218 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 ZSWIM4Q9H7M6 989 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 KCNH7Q9NS40 1196 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 COL4A3BPQ9Y5P4 624 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 PTPRSQ13332 1948 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 NFASCO94856 1347 aa19■□□□□ 0.63
PHGDH-234ENST00000642041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-234ENST00000642041 ASB14A6NK59 587 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 GNA14O95837 355 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 NR3C2P08235 984 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 TPM1P09493 284 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 SCP2P22307 547 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 CNTN2Q02246 1040 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 MCM6Q14566 821 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 ZNF746Q6NUN9 644 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-234ENST00000642041 ADHFE1Q8IWW8 467 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 FAM133AQ8N9E0 248 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 CCDC112Q8NEF3 446 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 NELFBQ8WX92 580 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 COL20A1Q9P218 1284 aa18.99■□□□□ 0.63
PHGDH-234ENST00000642041 H3BQ06 376 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-234ENST00000642041 GFRA3O60609 400 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 EIF3JO75822 258 aaKnown RBP18.98■□□□□ 0.63
PHGDH-234ENST00000642041 PRCPP42785 496 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 WDR5P61964 334 aaKnown RBP18.98■□□□□ 0.63
PHGDH-234ENST00000642041 TRIM14Q14142 442 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 STXBP2Q15833 593 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 B3GNT9Q6UX72 402 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 BMP8AQ7Z5Y6 402 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 P2RX5Q93086 422 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 TAAR1Q96RJ0 339 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 RAD9AQ99638 391 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 AGO4Q9HCK5 861 aaKnown RBP18.98■□□□□ 0.63
PHGDH-234ENST00000642041 PANK4Q9NVE7 773 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 IFNKQ9P0W0 207 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 ODF2LQ9ULJ1 636 aa18.98■□□□□ 0.63
PHGDH-234ENST00000642041 FRMD3A2A2Y4 597 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 MYMKA6NI61 221 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 WDR64B1ANS9 1081 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 ZNF500O60304 480 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 TGFB3P10600 412 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 EIF2AK2P19525 551 aaKnown RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 SLC12A3P55017 1021 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 BFSP2Q13515 415 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 ALCAMQ13740 583 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 HERC4Q5GLZ8 1057 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 IER5LQ5T953 404 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 CDKAL1Q5VV42 579 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 TAPT1Q6NXT6 567 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 MIER3Q7Z3K6 550 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 STAMQ92783 540 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 PLIN2Q99541 437 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 XPO4Q9C0E2 1151 aaKnown RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 PDGFCQ9NRA1 345 aa18.97■□□□□ 0.63
PHGDH-234ENST00000642041 LIMA1Q9UHB6 759 aaKnown RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 DBR1Q9UK59 544 aaKnown RBP18.97■□□□□ 0.63
PHGDH-234ENST00000642041 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.97■□□□□ 0.631e-6■□□□□ 10.9
PHGDH-234ENST00000642041 SIP14410 1827 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 LINC01553A4QN01 128 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 SOWAHBA6NEL2 793 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 CCP110O43303 1012 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 MED24O75448 989 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 SPATA31C1P0DKV0 1188 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 IDEP14735 1019 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 ITGB5P18084 799 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 ICAM3P32942 547 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 IRS1P35568 1242 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 EHHADHQ08426 723 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 FAM26FQ5R3K3 315 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 CENPPQ6IPU0 288 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 KLHL10Q6JEL2 608 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 OTUD6AQ7L8S5 288 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms