RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 DENND4AQ7Z401 1863 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 CPLX1O14810 134 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF862O60290 1169 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 PFKFB2O60825 505 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 HOXB8P17481 243 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 CASP10Q92851 521 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF577Q9BSK1 485 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
PHGDH-222ENST00000641587 SPG21Q9NZD8 308 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
PHGDH-222ENST00000641587 EPCAMP16422 314 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 PPM1AP35813 382 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 GPC3P51654 580 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 EVCP57679 992 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 KRT17Q04695 432 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 SCRN1Q12765 414 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 DRP2Q13474 957 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 UGCGQ16739 394 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 LONRF3Q496Y0 759 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF746Q6NUN9 644 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 MRPL43Q8N983 215 aaKnown RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 BCL7CQ8WUZ0 217 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
PHGDH-222ENST00000641587 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-222ENST00000641587 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-222ENST00000641587 PRR23AA6NEV1 266 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 HOXA2O43364 376 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
PHGDH-222ENST00000641587 PSAPP07602 524 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 CYP3A4P08684 503 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ZSCAN20P17040 1043 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-222ENST00000641587 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
PHGDH-222ENST00000641587 RCAN1P53805 252 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 BCAR1P56945 870 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 PRKCEQ02156 737 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 CUL4AQ13619 759 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 PRR16Q569H4 304 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 LPPQ93052 612 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 GJA10Q969M2 543 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 LENG9Q96B70 501 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 SAMM50Q9Y512 469 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 FAM186AA6NE01 2351 aa11.28□□□□□ -0.6
PHGDH-222ENST00000641587 RIF1Q5UIP0 2472 aaKnown RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 TMEM150BA6NC51 233 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 PROB1E7EW31 1015 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 CHMP2AO43633 222 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 EDIL3O43854 480 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 B4GALT3O60512 393 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 DTNBO60941 627 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 CDKL5O76039 1030 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 CXCL14O95715 111 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 OATP04181 439 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 ITIH3Q06033 890 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 KIAA1841Q6NSI8 718 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 VPS52Q8N1B4 723 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
PHGDH-222ENST00000641587 TMEM169Q96HH4 297 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 NECTIN4Q96NY8 510 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms