RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 LIMK1P53667 647 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 VBP1P61758 197 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TRPC3Q13507 836 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CNSTQ6PJW8 725 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT74Q7RTS7 529 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 C7orf61Q8IZ16 206 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CALML6Q8TD86 181 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SLC7A3Q8WY07 619 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MAML3Q96JK9 1138 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 DDX23Q9BUQ8 820 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NAA15Q9BXJ9 866 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZCWPW1Q9H0M4 648 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 EHD1Q9H4M9 534 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NLRC4Q9NPP4 1024 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP8A2Q9NTI2 1148 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGEF38Q9NXL2 777 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 COQ3Q9NZJ6 369 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SCAF8Q9UPN6 1271 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SLC8A2Q9UPR5 921 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 DMTF1Q9Y222 760 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGAP5Q13017 1502 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 WDR91A4D1P6 747 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KRBA1A5PL33 1030 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT87PA6NCN2 255 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 VSTM5A8MXK1 200 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SPTLC1O15269 473 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 OR5F1O95221 314 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ALOX5P09917 674 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 FDX1P10109 184 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 GSPT1P15170 499 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ITKQ08881 620 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 UGP2Q16851 508 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PLA2G4EQ3MJ16 856 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 RASIP1Q5U651 963 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PCNX4Q63HM2 1172 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 BORAQ6PGQ7 559 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TMEM151BQ8IW70 566 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM20CQ8IXL6 584 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM186BQ8IYM0 893 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SPICE1Q8N0Z3 855 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PPP2R3CQ969Q6 453 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 GBP5Q96PP8 586 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TBCBQ99426 244 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TINF2Q9BSI4 451 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ACAT2Q9BWD1 397 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 DNAJC18Q9H819 358 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KIAA1257Q9ULG3 409 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CD2APQ9Y5K6 639 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NOS1P29475 1434 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 HTR3EA5X5Y0 456 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 POTEMA6NI47 508 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 RSPH10B2B2RC85 870 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 H3BQF6 201 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 HLA-DRAP01903 254 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MT-ND3P03897 115 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 RSPH10BP0C881 870 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC166P0CW27 439 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CKBP12277 381 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PDCP20941 246 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 EEF1GP26641 437 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PCK1P35558 622 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 KPNA1P52294 538 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 RPP38P78345 283 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 MDM2Q00987 491 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 PPFIA1Q13136 1202 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 LAMC2Q13753 1193 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 STX1AQ16623 288 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 CAVIN4Q5BKX8 364 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 DCAF17Q5H9S7 520 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 POTEGQ6S5H5 508 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF554Q86TJ5 538 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC8Q8TAM2 541 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 ZKSCAN4Q969J2 545 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 COL26A1Q96A83 441 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SNX27Q96L92 541 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SCPEP1Q9HB40 452 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 NGRNQ9NPE2 291 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SEC63Q9UGP8 760 aaKnown RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC7AQ9ULT0 858 aaPredicted RBP4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SLC30A1Q9Y6M5 507 aa4.17□□□□□ -1.74
R3HDM1-220ENST00000628915 SSH2Q76I76 1423 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 NPHP3Q7Z494 1330 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 TRPM2O94759 1503 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 A0A0G2JPF8 293 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 HNRNPCL3B7ZW38 293 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP9BO43861 1147 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 HNRNPCL4P0DMR1 293 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CALM1P0DP23 149 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CALM2P0DP24 149 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 CALM3P0DP25 149 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 XRCC5P13010 732 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 NOP14P78316 857 aaKnown RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 IFFO1Q0D2I5 559 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 DPYSQ14117 519 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 MLC1Q15049 377 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 ACAP2Q15057 778 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 Q3ZCU0 254 aa4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 SETMARQ53H47 684 aaPredicted RBP4.16□□□□□ -1.74
R3HDM1-220ENST00000628915 WLSQ5T9L3 541 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms