RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 ALCAMQ13740 583 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 CBWD6Q4V339 395 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 CBWD3Q5JTY5 395 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 CBWD5Q5RIA9 395 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 AGBL2Q5U5Z8 902 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 CHURC1Q8WUH1 139 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 TMEM174Q8WUU8 243 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 ZNF622Q969S3 477 aaKnown RBP eCLIP20.81■□□□□ 0.921e-20■□□□□ 8.4
PTBP1-220ENST00000627714 ZNF577Q9BSK1 485 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 RANBP17Q9H2T7 1088 aaKnown RBP20.81■□□□□ 0.92
PTBP1-220ENST00000627714 GGA2Q9UJY4 613 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 TMX2Q9Y320 296 aa20.81■□□□□ 0.92
PTBP1-220ENST00000627714 DDX3YO15523 660 aaKnown RBP20.8■□□□□ 0.92
PTBP1-220ENST00000627714 BCRP11274 1271 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 ITGA4P13612 1032 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 CYP2J2P51589 502 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 PTENP60484 403 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 RHOT2Q8IXI1 618 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 SPICE1Q8N0Z3 855 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 C3orf20Q8ND61 904 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 STRA6Q9BX79 667 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 TEKT3Q9BXF9 490 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 OSGEPQ9NPF4 335 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 DAPK3O43293 454 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 KIAA0754O94854 1291 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 ERLIN2O94905 339 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 FGGP02679 453 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 POU5F1Q01860 360 aaKnown RBP20.8■□□□□ 0.92
PTBP1-220ENST00000627714 ZNF844Q08AG5 666 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 CETN1Q12798 172 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 PLS1Q14651 629 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 COG2Q14746 738 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 PTPROQ16827 1216 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 YTHDF3Q7Z739 585 aaKnown RBP20.8■□□□□ 0.92
PTBP1-220ENST00000627714 PACS2Q86VP3 889 aa20.8■□□□□ 0.92
PTBP1-220ENST00000627714 DDX42Q86XP3 938 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■□□□□ 10.6
PTBP1-220ENST00000627714 ARHGEF35A5YM69 484 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 P4HA2O15460 535 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 TTI1O43156 1089 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 EXOC3O60645 756 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 PLA2G6O60733 806 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 MAPTP10636 758 aaKnown RBP20.79■□□□□ 0.92
PTBP1-220ENST00000627714 KRT13P13646 458 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 INPP5BP32019 993 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 STYK1Q6J9G0 422 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 B3GNT9Q6UX72 402 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 TMC3Q7Z5M5 1100 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 FLAD1Q8NFF5 587 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 RIT2Q99578 217 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 NEUROG2Q9H2A3 272 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 RABEP2Q9H5N1 569 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTBP1-220ENST00000627714 SAMM50Q9Y512 469 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 PFASO15067 1338 aa20.79■□□□□ 0.92
PTBP1-220ENST00000627714 MMP10P09238 476 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 TCEAL1Q15170 157 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 NAA35Q5VZE5 725 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 INTS8Q75QN2 995 aaKnown RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 COL23A1Q86Y22 540 aaPredicted RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 SYCP3Q8IZU3 236 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 MICALL1Q8N3F8 863 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 UBLCP1Q8WVY7 318 aaPredicted RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 IKZF4Q9H2S9 585 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 UNC45AQ9H3U1 944 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 TMEM206Q9H813 350 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 FAM187AA6NFU0 413 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 FAM107AO95990 144 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 EIF3BP55884 814 aaKnown RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 RRP1BQ14684 758 aaKnown RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 ZNF473Q8WTR7 871 aaKnown RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 BBXQ8WY36 941 aaPredicted RBP20.78■□□□□ 0.92
PTBP1-220ENST00000627714 TMOD2Q9NZR1 351 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 PPP1R9AQ9ULJ8 1098 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 MYH11P35749 1972 aa20.78■□□□□ 0.92
PTBP1-220ENST00000627714 MIF4GDA9UHW6 222 aaKnown RBP20.77■□□□□ 0.92
PTBP1-220ENST00000627714 TRIM49P0CI25 452 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 TRIM49CP0CI26 452 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 HSPA6P17066 643 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 ABCB4P21439 1286 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 DHX34Q14147 1143 aaKnown RBP20.77■□□□□ 0.92
PTBP1-220ENST00000627714 FAM160B2Q86V87 743 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 NLRP14Q86W24 1093 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 LXNQ9BS40 222 aa20.77■□□□□ 0.92
PTBP1-220ENST00000627714 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.77■□□□□ 0.921e-8■■■■■ 28.9
PTBP1-220ENST00000627714 ZBTB39O15060 712 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 MEFVO15553 781 aaPredicted RBP20.77■□□□□ 0.91
PTBP1-220ENST00000627714 ECE1P42892 770 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 C11orf63Q6NUN7 778 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 KSR1Q8IVT5 923 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 C12orf56Q8IXR9 622 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 MYCBPAPQ8TBZ2 947 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 AGPAT1Q99943 283 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 LARSQ9P2J5 1176 aaKnown RBP20.77■□□□□ 0.91
PTBP1-220ENST00000627714 IGSF9BQ9UPX0 1349 aa20.77■□□□□ 0.91
PTBP1-220ENST00000627714 MYO1FO00160 1098 aa20.76■□□□□ 0.91
PTBP1-220ENST00000627714 HIP1RO75146 1068 aa20.76■□□□□ 0.91
PTBP1-220ENST00000627714 CCDC174Q6PII3 467 aa20.76■□□□□ 0.91
PTBP1-220ENST00000627714 KRT27Q7Z3Y8 459 aa20.76■□□□□ 0.91
PTBP1-220ENST00000627714 LMO3Q8TAP4 145 aa20.76■□□□□ 0.91
PTBP1-220ENST00000627714 CCT8L2Q96SF2 557 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms