RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PFASO15067 1338 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 PREX1Q8TCU6 1659 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 CHEK2O96017 543 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 TBXAS1P24557 533 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 ADORA2BP29275 332 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 EPHX2P34913 555 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 CPT1AP50416 773 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 SF3B3Q15393 1217 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 TMEM270Q6UE05 265 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 MXD3Q9BW11 206 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 ADARB2Q9NS39 739 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 KLHL14Q9P2G3 628 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 DOLKQ9UPQ8 538 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 M0QYV0 167 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 PAPOLAP51003 745 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 ADCY1Q08828 1119 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 CYFIP1Q7L576 1253 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 GRAMD1CQ8IYS0 662 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 SEPT1Q8WYJ6 367 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 FGD4Q96M96 766 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 VCX3AQ9NNX9 186 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 ITM2BQ9Y287 266 aa10.48□□□□□ -0.73
CLTCL1-211ENST00000621271 KDM6AO15550 1401 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 MAGEB2O15479 319 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 GRIK1P39086 918 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 SH3KBP1Q96B97 665 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 THAP9Q9H5L6 903 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 SP110Q9HB58 689 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 GBA2Q9HCG7 927 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 UBE4BO95155 1302 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 MSH2P43246 934 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 DPCR1Q3MIW9 517 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 C10orf76Q5T2E6 689 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 LINC00301Q8NCQ3 95 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 NEDD4P46934 1319 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 TMEM247A6NEH6 219 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 SART1O43290 800 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 CTNND1O60716 968 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 HSPA6P17066 643 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 ORC2Q13416 577 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 TFDP2Q14188 446 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 LLGL1Q15334 1064 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 CEP55Q53EZ4 464 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 UNC13DQ70J99 1090 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 ARRDC4Q8NCT1 418 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 SCFD2Q8WU76 684 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 SEL1LQ9UBV2 794 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 RCOR1Q9UKL0 485 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 CALB1P05937 261 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 GCLMP48507 274 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 AP3M2P53677 418 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 FBXW4P57775 412 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 TGFB2P61812 414 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 CCDC170Q8IYT3 715 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 EFHBQ8N7U6 833 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 MTA3Q9BTC8 594 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 NDST4Q9H3R1 872 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 ADAMTS13Q76LX8 1427 aa10.47□□□□□ -0.73
CLTCL1-211ENST00000621271 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 E9PMD0 336 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 CREB3O43889 395 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 ESRRBO95718 433 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 TTC4O95801 387 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 STAG3L1P0CL83 205 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 PNMA6AP0CW24 399 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 SF3A3Q12874 501 aaKnown RBP eCLIP10.46□□□□□ -0.733e-8■■■■■ 54.4
CLTCL1-211ENST00000621271 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 SUDS3Q9H7L9 328 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 BAIAP2L1Q9UHR4 511 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 LCMT1Q9UIC8 334 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 MID2Q9UJV3 735 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 DAAM1Q9Y4D1 1078 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 SLIT1O75093 1534 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 PPRC1Q5VV67 1664 aaKnown RBP10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 PRKCBP05771 671 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 ARL4DP49703 201 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 DGKDQ16760 1214 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 XKR3Q5GH77 459 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 EFHC2Q5JST6 749 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 LRRC8CQ8TDW0 803 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 AIFM3Q96NN9 605 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 EDEM3Q9BZQ6 932 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 TMEM260Q9NX78 707 aa10.46□□□□□ -0.73
CLTCL1-211ENST00000621271 PIK3C2BO00750 1634 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms