RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 TXLNAP40222 546 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 MCM2P49736 904 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 ADAM17P78536 824 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 ZNF200P98182 395 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 SETQ01105 290 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PTGISQ16647 500 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 SH3PXD2AQ5TCZ1 1133 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PPP4R3AQ6IN85 833 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 MOXD1Q6UVY6 613 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PIK3AP1Q6ZUJ8 805 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PGBD3Q8N328 593 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 FAM200AQ8TCP9 573 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 DHX38Q92620 1227 aaKnown RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 SLC5A5Q92911 643 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 GJA10Q969M2 543 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 LBHD1Q9BQE6 289 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 UBE2OQ9C0C9 1292 aaKnown RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 WNT8AQ9H1J5 351 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 HIPK3Q9H422 1215 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 TBC1D22BQ9NU19 505 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 TRIP12Q14669 1992 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-209ENST00000620502 WDR81Q562E7 1941 aa7.38□□□□□ -1.23
BRCC3-209ENST00000620502 CCDC194A0A1B0GVG4 234 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 A0A1W2PPC1 479 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 DDX39AO00148 427 aaKnown RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SLC37A4O43826 429 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 PSMD10O75832 226 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 CSF2RAP15509 400 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 CCL23P55773 120 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 HMGN5P82970 282 aaKnown RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 INSM1Q01101 510 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 GUCY1B3Q02153 619 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 FPGSQ05932 587 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 TRIM29Q14134 588 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 GPNMBQ14956 572 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SHHQ15465 462 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 TRIM71Q2Q1W2 868 aaKnown RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 LETM2Q2VYF4 491 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 MARCH8Q5T0T0 291 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 FOXR1Q6PIV2 292 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 B3GNT9Q6UX72 402 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 PLPPR4Q7Z2D5 763 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 NEK8Q86SG6 692 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 DIS3L2Q8IYB7 885 aaKnown RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 TDHQ8IZJ6 230 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 TMEM199Q8N511 208 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 FBXO18Q8NFZ0 1043 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 ETNPPLQ8TBG4 499 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SCG3Q8WXD2 468 aaKnown RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 HAS1Q92839 578 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 WNT8BQ93098 351 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 C8orf76Q96K31 380 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 CNTNAP3BQ96NU0 1288 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 RIT2Q99578 217 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 CNTNAP3Q9BZ76 1288 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SMARCAD1Q9H4L7 1026 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SETD4Q9NVD3 440 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 ERAP1Q9NZ08 941 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 ZNF215Q9UL58 517 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-209ENST00000620502 SCN5AQ14524 2016 aa7.37□□□□□ -1.23
BRCC3-209ENST00000620502 TANC1Q9C0D5 1861 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 NRCAMQ92823 1304 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 A0A1W2PNR3 127 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 C17orf102A2RUQ5 167 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 KIF28PB7ZC32 967 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 TREHO43280 583 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 CCNT1O60563 726 aaKnown RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 MARK3P27448 753 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 STAT5BP51692 787 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 RBL2Q08999 1139 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 CUL4AQ13619 759 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 PLCB4Q15147 1175 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 SWSAP1Q6NVH7 229 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 MIS18BP1Q6P0N0 1132 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 SERINC5Q86VE9 423 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 NLRP8Q86W28 1048 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 CCDC60Q8IWA6 550 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 SMAP1Q8IYB5 467 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 FAM184AQ8NB25 1140 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 AFAP1L1Q8TED9 768 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 LMBR1Q8WVP7 490 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 GLG1Q92896 1179 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 SCLYQ96I15 445 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.36□□□□□ -1.232e-6■■■■□ 23.3
BRCC3-209ENST00000620502 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 FOXP1Q9H334 677 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 UNC45AQ9H3U1 944 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 KCNMB3Q9NPA1 279 aa7.36□□□□□ -1.23
BRCC3-209ENST00000620502 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
BRCC3-209ENST00000620502 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms