RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 RPP25Q9BUL9 199 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 DDX23Q9BUQ8 820 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MAP10Q9P2G4 905 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 LZTS1Q9Y250 596 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 PNMA6EA0A0J9YXQ4 647 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CDC14CA4D256 554 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 PYCARD-AS1I3L0S3 204 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 PRDM1O75626 825 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 PROCP04070 461 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CELA2BP08218 269 aaPredicted RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SLC16A2P36021 539 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SLC1A4P43007 532 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 GPC5P78333 572 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SRSF11Q05519 484 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 G3BP1Q13283 466 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SIM2Q14190 667 aaPredicted RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 SMC1AQ14683 1233 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 TSHZ1Q6ZSZ6 1077 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 CRELD1Q96HD1 420 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 BCAS3Q9H6U6 928 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 DZANK1Q9NVP4 752 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MTMR4Q9NYA4 1195 aa8.1□□□□□ -1.11
SCAMP1-206ENST00000618166 MIA3Q5JRA6 1907 aa8.09□□□□□ -1.11
SCAMP1-206ENST00000618166 MYH4Q9Y623 1939 aa8.09□□□□□ -1.11
SCAMP1-206ENST00000618166 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 H3BRB1 525 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 STAG3L1P0CL83 205 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 FGFR1P11362 822 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ADAM17P78536 824 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ARHGAP4P98171 946 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SRSF1Q07955 248 aaKnown RBP eCLIP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 MTX1Q13505 466 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 LAMC2Q13753 1193 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 WTAPQ15007 396 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SYDE2Q5VT97 1194 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 CABP7Q86V35 215 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 TRIM50Q86XT4 487 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 C12orf50Q8NA57 414 aaPredicted RBP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 DNERQ8NFT8 737 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SLC22A17Q8WUG5 538 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 LMBR1Q8WVP7 490 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SSH1Q8WYL5 1049 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ZBTB10Q96DT7 871 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 GMCL1Q96IK5 515 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SPATA33Q96N06 139 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ARRDC1-AS1Q9H2J1 176 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 RANBP17Q9H2T7 1088 aaKnown RBP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 TMX1Q9H3N1 280 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 TUT1Q9H6E5 874 aaKnown RBP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 LTB4R2Q9NPC1 389 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ATP8A2Q9NTI2 1148 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 COL20A1Q9P218 1284 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 EPS15L1Q9UBC2 864 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 PUF60Q9UHX1 559 aaKnown RBP8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 MTMR7Q9Y216 660 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 NUMBLQ9Y6R0 609 aa8.09□□□□□ -1.12
SCAMP1-206ENST00000618166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 MGEA5O60502 916 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 PPFIA4O75335 1185 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TTLL1O95922 423 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 LGALS2P05162 132 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 HOXC13P31276 330 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 SP2Q02086 613 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 FZD5Q13467 585 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 HTR4Q13639 388 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 NONOQ15233 471 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 MLF2Q15773 248 aaPredicted RBP8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 SH3PXD2AQ5TCZ1 1133 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 MYSM1Q5VVJ2 828 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TCEAL6Q6IPX3 200 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 Q6ZVU0 165 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 CCDC116Q8IYX3 515 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TAAR1Q96RJ0 339 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 MPHOSPH6Q99547 160 aaKnown RBP8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 SFXN1Q9H9B4 322 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 TELO2Q9Y4R8 837 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 MRVI1Q9Y6F6 885 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 CDY2AQ9Y6F7 541 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 C2orf16Q68DN1 1984 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 ZBED9Q6R2W3 1325 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
SCAMP1-206ENST00000618166 CXCL14O95715 111 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 MYBP10242 640 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 LAG3P18627 525 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 RARSP54136 660 aaKnown RBP8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 TMEM266Q2M3C6 531 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 KCNT2Q6UVM3 1135 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 ZNF605Q86T29 641 aa8.07□□□□□ -1.12
SCAMP1-206ENST00000618166 WDR63Q8IWG1 891 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms