RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 PROM2Q8N271 834 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 TTC8Q8TAM2 541 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 PWWP2AQ96N64 755 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 GBP5Q96PP8 586 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 IL17RBQ9NRM6 502 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 SUCLA2Q9P2R7 463 aaPredicted RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 MAD2L2Q9UI95 211 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 MTUS1Q9ULD2 1270 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 BZW2Q9Y6E2 419 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 ATRNO75882 1429 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ATMINO43313 823 aaPredicted RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 CBX6O95503 412 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 KRT15P19012 456 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 KLRK1P26718 216 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 EPHB2P29323 1055 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ALDH3A1P30838 453 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 MARCKSL1P49006 195 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ADCY7P51828 1080 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 MAPK7Q13164 816 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 LAMB3Q13751 1172 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 RBM26Q5T8P6 1007 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 CDCA2Q69YH5 1023 aaPredicted RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 SCYL3Q8IZE3 742 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 UBL4BQ8N7F7 174 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 LRRC57Q8N9N7 239 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 CNBD1Q8NA66 436 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DNAJC9Q8WXX5 260 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 KRT35Q92764 455 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 SYN2Q92777 582 aaPredicted RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 C9orf72Q96LT7 481 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 LRRC37BQ96QE4 947 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 NT5C3AQ9H0P0 336 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 THAP2Q9H0W7 228 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 IKZF4Q9H2S9 585 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 SH3GLB2Q9NR46 395 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DDX25Q9UHL0 483 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 LTN1O94822 1766 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 POTEFA5A3E0 1075 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ANKRD62A6NC57 917 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 POTEIP0CG38 1075 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 FERP16591 822 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 PON1P27169 355 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ADCY8P40145 1251 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 TUBP50607 506 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 PTENP60484 403 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 CTTNQ14247 550 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 GRM4Q14833 912 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 DRAP1Q14919 205 aaPredicted RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 ECM1Q16610 540 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 POTEGQ6S5H5 508 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 POTEEQ6S8J3 1075 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 VPS52Q8N1B4 723 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 RBM46Q8TBY0 533 aaKnown RBP7.18□□□□□ -1.26
LMO3-235ENST00000616247 LRRC8CQ8TDW0 803 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 PIGOQ8TEQ8 1089 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ATP8B4Q8TF62 1192 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ALG3Q92685 438 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 CENPTQ96BT3 561 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ARHGEF26Q96DR7 871 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 PGM2Q96G03 612 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ADAM7Q9H2U9 754 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 TXLNGQ9NUQ3 528 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 USP40Q9NVE5 1235 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.18□□□□□ -1.26
LMO3-235ENST00000616247 SCOCQ9UIL1 159 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 ALG6Q9Y672 507 aa7.18□□□□□ -1.26
LMO3-235ENST00000616247 NFAT5O94916 1531 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 KIAA0391O15091 583 aaKnown RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 RIPK2O43353 540 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 TBCAO75347 108 aaKnown RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 UBTFL6P0CB48 400 aaPredicted RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 ZCCHC18P0CG32 403 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 TRIM49P0CI25 452 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 TRIM49CP0CI26 452 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 SLC16A2P36021 539 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 BNIP1Q12981 228 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 TRAF1Q13077 416 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 SLC35G1Q2M3R5 365 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 DUPD1Q68J44 220 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 GALNT17Q6IS24 598 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 SFR1Q86XK3 245 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 CLEC10AQ8IUN9 316 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 KIAA0825Q8IV33 1275 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 TAB3Q8N5C8 712 aaPredicted RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 SCFD1Q8WVM8 642 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 SPOCK2Q92563 424 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 STMN2Q93045 179 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 MCUR1Q96AQ8 359 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 BTBD6Q96KE9 485 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 EYA3Q99504 573 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 DDX50Q9BQ39 737 aaKnown RBP7.17□□□□□ -1.26
LMO3-235ENST00000616247 GANQ9H2C0 597 aa7.17□□□□□ -1.26
LMO3-235ENST00000616247 RXFP1Q9HBX9 757 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms