RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 EXOC8Q8IYI6 725 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 RPUSD2Q8IZ73 545 aaKnown RBP20.93■□□□□ 0.94
CCDC9-205ENST00000600117 METTL13Q8N6R0 699 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 DNAJB3Q8WWF6 145 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 SLC7A3Q8WY07 619 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 JPH2Q9BR39 696 aaPredicted RBP20.93■□□□□ 0.94
CCDC9-205ENST00000600117 NOC4LQ9BVI4 516 aaKnown RBP20.93■□□□□ 0.94
CCDC9-205ENST00000600117 FAM49AQ9H0Q0 323 aaPredicted RBP20.93■□□□□ 0.94
CCDC9-205ENST00000600117 EPHX3Q9H6B9 360 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 SUGCTQ9HAC7 445 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 ATP6V0A4Q9HBG4 840 aa20.93■□□□□ 0.94
CCDC9-205ENST00000600117 GAS2O43903 313 aaKnown RBP20.92■□□□□ 0.94
CCDC9-205ENST00000600117 PRPF40AO75400 957 aaKnown RBP20.92■□□□□ 0.94
CCDC9-205ENST00000600117 SSBP05455 408 aaKnown RBP eCLIP20.92■□□□□ 0.94
CCDC9-205ENST00000600117 MYOGP15173 224 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 CCL23P55773 120 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 ARSHQ5FYA8 562 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 IQUBQ8NA54 791 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 RETREG2Q8NC44 543 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 ENGASEQ8NFI3 743 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 MTRQ99707 1265 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 CUEDC2Q9H467 287 aa20.92■□□□□ 0.94
CCDC9-205ENST00000600117 ACTN4O43707 911 aaKnown RBP20.91■□□□□ 0.94
CCDC9-205ENST00000600117 GTPBP6O43824 516 aaPredicted RBP20.91■□□□□ 0.94
CCDC9-205ENST00000600117 SYKP43405 635 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 UBE2HP62256 183 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 DHX8Q14562 1220 aaKnown RBP20.91■□□□□ 0.94
CCDC9-205ENST00000600117 TMEM31Q5JXX7 168 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 TRAF7Q6Q0C0 670 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 GPBP1Q86WP2 473 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 MCPH1Q8NEM0 835 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 CAGE1Q8TC20 777 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 TMEM143Q96AN5 459 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 PYM1Q9BRP8 204 aaKnown RBP20.91■□□□□ 0.94
CCDC9-205ENST00000600117 WNT8AQ9H1J5 351 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 GPRC5CQ9NQ84 441 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 LMBRD1Q9NUN5 540 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 COG5Q9UP83 839 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 MTCH2Q9Y6C9 303 aa20.91■□□□□ 0.94
CCDC9-205ENST00000600117 CAND2O75155 1236 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 CKBP12277 381 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 ATP2A2P16615 1042 aaKnown RBP20.9■□□□□ 0.94
CCDC9-205ENST00000600117 LIG1P18858 919 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 GUCY2CP25092 1073 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 TMOD1P28289 359 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 MAPK7Q13164 816 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 IER5Q5VY09 327 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 SV2BQ7L1I2 683 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 FMR1NBQ8N0W7 255 aaPredicted RBP20.9■□□□□ 0.94
CCDC9-205ENST00000600117 DAW1Q8N136 415 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 NME8Q8N427 588 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 KBTBD4Q9NVX7 518 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 KCND2Q9NZV8 630 aa20.9■□□□□ 0.94
CCDC9-205ENST00000600117 SUCLA2Q9P2R7 463 aaPredicted RBP20.9■□□□□ 0.94
CCDC9-205ENST00000600117 MYMKA6NI61 221 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 ZBBXA8MT70 800 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 PITPNM1O00562 1244 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF202O95125 648 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 VTNP04004 478 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 RPLP2P05387 115 aaKnown RBP20.89■□□□□ 0.93
CCDC9-205ENST00000600117 SLFN14P0C7P3 912 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 ARL2P36404 184 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 THPOP40225 353 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 MGAT3Q09327 533 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 BFSP2Q13515 415 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 SNW1Q13573 536 aaKnown RBP20.89■□□□□ 0.93
CCDC9-205ENST00000600117 LONRF3Q496Y0 759 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 FAM26DQ5JW98 314 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF618Q5T7W0 954 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 MAEAQ7L5Y9 396 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 CCDC155Q8N6L0 562 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 TCP11Q8WWU5 503 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 VWCEQ96DN2 955 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 MAP7D2Q96T17 732 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 POLR3FQ9H1D9 316 aaPredicted RBP20.89■□□□□ 0.93
CCDC9-205ENST00000600117 TNMDQ9H2S6 317 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 MAGEF1Q9HAY2 307 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 POLD4Q9HCU8 107 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 USP25Q9UHP3 1055 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 TANC1Q9C0D5 1861 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 SIP14410 1827 aa20.89■□□□□ 0.93
CCDC9-205ENST00000600117 NPHP3-ACAD11A0A0J9YXS1 232 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 TLL1O43897 1013 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 DNM2P50570 870 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 MRPS6P82932 125 aaKnown RBP20.88■□□□□ 0.93
CCDC9-205ENST00000600117 FAM160A1Q05DH4 1040 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 RSPH3Q86UC2 560 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 ASAP3Q8TDY4 903 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 PRPF31Q8WWY3 499 aaKnown RBP20.88■□□□□ 0.93
CCDC9-205ENST00000600117 STAMQ92783 540 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 TIPINQ9BVW5 301 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 AKT3Q9Y243 479 aa20.88■□□□□ 0.93
CCDC9-205ENST00000600117 HIP1RO75146 1068 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 GPR32O75388 356 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 CHRNA1P02708 482 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 PFKMP08237 780 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 CTSHP09668 335 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 SELPP16109 830 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 GLRA2P23416 452 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms