RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GUCA1BQ9UMX6 200 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 ZMYM2Q9UBW7 1377 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 PARP14Q460N5 1801 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 BTNL10A8MVZ5 291 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 EPHB6O15197 1021 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS25-203ENST00000589520 STBD1O95210 358 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 RFC5P40937 340 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 STAT1P42224 750 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 FMO5P49326 533 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CASP4P49662 377 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 PEX3P56589 373 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CCNA1P78396 465 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 KCNA1Q09470 495 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 KLHL30Q0D2K2 578 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 BFSP1Q12934 665 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 SLC18A3Q16572 532 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 TDRD12Q587J7 1177 aaKnown RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 DCAF17Q5H9S7 520 aaPredicted RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 DPY19L2P1Q6NXN4 242 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 FAM167AQ96KS9 214 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
VPS25-203ENST00000589520 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 STK33Q9BYT3 514 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 KMT5AQ9NQR1 393 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CYP26B1Q9NR63 512 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 JRKLQ9Y4A0 524 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
VPS25-203ENST00000589520 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 TADA3O75528 432 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 ERCC3P19447 782 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 GARTP22102 1010 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 GTF2H1P32780 548 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 NPTX2P47972 431 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 CKAP4Q07065 602 aaKnown RBP11.33□□□□□ -0.6
VPS25-203ENST00000589520 KCTD2Q14681 263 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
VPS25-203ENST00000589520 UGCGQ16739 394 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 METTL7BQ6UX53 244 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 AFAP1L1Q8TED9 768 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 RABGGTAQ92696 567 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
VPS25-203ENST00000589520 CRACR2AQ9BSW2 395 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
VPS25-203ENST00000589520 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
VPS25-203ENST00000589520 ASB14A6NK59 587 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
VPS25-203ENST00000589520 CNMDO75829 334 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 OATP04181 439 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 SLC9A1P19634 815 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 SLC26A2P50443 739 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 CYP2J2P51589 502 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 VAMP7P51809 220 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 NPEPPSP55786 919 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 JAM2P57087 298 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 PRKCEQ02156 737 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 RAPGEF1Q13905 1077 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 UTP14CQ5TAP6 766 aaKnown RBP11.32□□□□□ -0.6
VPS25-203ENST00000589520 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 IQCEQ6IPM2 695 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 MAEAQ7L5Y9 396 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 TRAPPC11Q7Z392 1133 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 OPTNQ96CV9 577 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 NOX5Q96PH1 765 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
VPS25-203ENST00000589520 POLD4Q9HCU8 107 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
VPS25-203ENST00000589520 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
VPS25-203ENST00000589520 DENND3A2RUS2 1198 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CTAGE15A4D2H0 777 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 FANCGO15287 622 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 SLC16A4O15374 487 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms