RNA–Protein interactions for RNA: ENST00000577812.5

NARF-209, Transcript of nuclear prelamin A recognition factor, human

TSL 5

Gene NARF, Length 2,598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-209	ENST00000577812	UBOX5	O94941	541 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	AGT	P01019	485 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	RARA	P10276	462 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	NR2F2	P24468	414 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	GSTO1	P78417	241 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	CUL3	Q13618	768 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	DHX34	Q14147	1143 aa	Known RBP	12.8	□□□□□ -0.36
NARF-209	ENST00000577812	PTPRO	Q16827	1216 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	USP17L2	Q6R6M4	530 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	LRRC34	Q8IZ02	419 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	ATP8B4	Q8TF62	1192 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	DTNBP1	Q96EV8	351 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	ERP44	Q9BS26	406 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	GOPC	Q9HD26	462 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	INTS9	Q9NV88	658 aa	Known RBP	12.8	□□□□□ -0.36
NARF-209	ENST00000577812	DAAM1	Q9Y4D1	1078 aa		12.8	□□□□□ -0.36
NARF-209	ENST00000577812	HIP1R	O75146	1068 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	ACTN1	P12814	892 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	SLC9A1	P19634	815 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	MSH2	P43246	934 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	DRG2	P55039	364 aa	Known RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	ERFE	Q4G0M1	354 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	DUPD1	Q68J44	220 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TRIM68	Q6AZZ1	485 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TRIM74	Q86UV6	250 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TRIM73	Q86UV7	250 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	COL23A1	Q86Y22	540 aa	Predicted RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	FBF1	Q8TES7	1133 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	EYA3	Q99504	573 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	RIOX1	Q9H6W3	641 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	ABCF3	Q9NUQ8	709 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TFCP2L1	Q9NZI6	479 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	RNF8	O76064	485 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	PYGL	P06737	847 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	SETSIP	P0DME0	302 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	XRCC5	P13010	732 aa	Known RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	KLRK1	P26718	216 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	PON1	P27169	355 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	RANBP1	P43487	201 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	COPS2	P61201	443 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	EN1	Q05925	392 aa	Predicted RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	ECM1	Q16610	540 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	SGSM1	Q2NKQ1	1148 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	LRRC23	Q53EV4	343 aa	Predicted RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	CMPK2	Q5EBM0	449 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	NEDD1	Q8NHV4	660 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	FAM81A	Q8TBF8	368 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	BICD1	Q96G01	975 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	NAP1L4	Q99733	375 aa	Known RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TRIM51	Q9BSJ1	452 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	TRIM31	Q9BZY9	425 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	CARD9	Q9H257	536 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	ZDHHC18	Q9NUE0	388 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	DDX25	Q9UHL0	483 aa	Known RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	CNOT7	Q9UIV1	285 aa	Known RBP	12.79	□□□□□ -0.36
NARF-209	ENST00000577812	PITPNM2	Q9BZ72	1349 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	NAV1	Q8NEY1	1877 aa		12.79	□□□□□ -0.36
NARF-209	ENST00000577812	GPR75-ASB3	A0A0A6YYF3	556 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	COQ9	O75208	318 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	KRT18	P05783	430 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	LDHB	P07195	334 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PLA2G4B	P0C869	781 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PCK1	P35558	622 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	APLP1	P51693	650 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	DYNC1I2	Q13409	638 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	DPY19L2P1	Q6NXN4	242 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PPP1R18	Q6NYC8	613 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	TAOK1	Q7L7X3	1001 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	GPBP1	Q86WP2	473 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	SLC44A5	Q8NCS7	719 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	CELF1	Q92879	486 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	EPAS1	Q99814	870 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	MXD3	Q9BW11	206 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	FGFBP2	Q9BYJ0	223 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	METTL14	Q9HCE5	456 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	1e-6	■□□□□ 8.6
NARF-209	ENST00000577812	ADAM22	Q9P0K1	906 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PARP2	Q9UGN5	583 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PCDHA12	Q9UN75	941 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	STK38L	Q9Y2H1	464 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	ASB3	Q9Y575	518 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	COL24A1	Q17RW2	1714 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812		E7ENQ6	273 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	KRT16	P08779	473 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	TNNI2	P48788	182 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	KCNQ4	P56696	695 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	CLEC4G	Q6UXB4	293 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	BTNL9	Q6UXG8	535 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	FAM196A	Q6ZSG2	479 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	SMIM5	Q71RC9	77 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	PTF1A	Q7RTS3	328 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	RBM46	Q8TBY0	533 aa	Known RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.78	□□□□□ -0.36
NARF-209	ENST00000577812	ARHGEF3	Q9NR81	526 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	WDR35	Q9P2L0	1181 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	TRAF3IP3	Q9Y228	551 aa		12.78	□□□□□ -0.36
NARF-209	ENST00000577812	C2CD2	Q9Y426	696 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms