RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 KIAA0895Q8NCT3 520 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 NLGN2Q8NFZ4 835 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 DNAJC18Q9H819 358 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 SH3GLB2Q9NR46 395 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 IL17RBQ9NRM6 502 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 ZDHHC18Q9NUE0 388 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 AIPL1Q9NZN9 384 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 ADAM22Q9P0K1 906 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 PIM2Q9P1W9 311 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 CEP72Q9P209 647 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 V9GY48 417 aaPredicted RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 USP17L12C9JPN9 530 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 USP17L21D6R901 530 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 PDLIM1O00151 329 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 BACH1O14867 736 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 SNX3O60493 162 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 AP1G2O75843 785 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 KIF4AO95239 1232 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 USP17L8P0C7I0 530 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 CHN1P15882 459 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 IBSPP21815 317 aaPredicted RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 PDIA5Q14554 519 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 TBC1D25Q3MII6 688 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 CCDC38Q502W7 563 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 C10orf76Q5T2E6 689 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 CDC42EP5Q6NZY7 148 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 LRRC55Q6ZSA7 311 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 SH3BP5LQ7L8J4 393 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 LRRC34Q8IZ02 419 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 GALNT15Q8N3T1 639 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 ANKRD13CQ8N6S4 541 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 GBP7Q8N8V2 638 aaPredicted RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 MDM1Q8TC05 714 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 ZBTB10Q96DT7 871 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 IFT43Q96FT9 208 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 ZSCAN10Q96SZ4 725 aaPredicted RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 PHOX2BQ99453 314 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 NACAP1Q9BZK3 213 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 RAB17Q9H0T7 212 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 FAM114A2Q9NRY5 505 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 FAM198AQ9UFP1 575 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 CNOT7Q9UIV1 285 aaKnown RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 SH3BP1Q9Y3L3 701 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 FARP1Q9Y4F1 1045 aaPredicted RBP5.91□□□□□ -1.46
LINC01541-202ENST00000568095 SCN4AP35499 1836 aa5.91□□□□□ -1.46
LINC01541-202ENST00000568095 A0A0G2JMZ2 1700 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 FZD9O00144 591 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 O00370 1275 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 CTNND1O60716 968 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 CAND2O75155 1236 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 FTCDO95954 541 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 CLTAP09496 248 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 RASA1P20936 1047 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 MCM7P33993 719 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SSR1P43307 286 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 CRKP46108 304 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 EHHADHQ08426 723 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 THEMIS2Q5TEJ8 643 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 DPY19L2P1Q6NXN4 242 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 RSBN1LQ6PCB5 846 aaPredicted RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SLC30A9Q6PML9 568 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 PIK3AP1Q6ZUJ8 805 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 TBC1D1Q86TI0 1168 aaPredicted RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 ERICH1Q86X53 443 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 DDX42Q86XP3 938 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SRBD1Q8N5C6 995 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 DAGLBQ8NCG7 672 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 ABCF3Q9NUQ8 709 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 LIMD1Q9UGP4 676 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 FLOT1O75955 427 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 UBOX5O94941 541 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 LDHCP07864 332 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 MMEP08473 750 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 KRT16P08779 473 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 NEFHP12036 1026 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SCG2P13521 617 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 PLCG2P16885 1265 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 DRG2P55039 364 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 ZNF280AP59817 542 aaPredicted RBP5.9□□□□□ -1.46
LINC01541-202ENST00000568095 COPS2P61201 443 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SLC9C1Q4G0N8 1177 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 ANO7Q6IWH7 933 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 HOOK3Q86VS8 718 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SPICE1Q8N0Z3 855 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 SH3TC2Q8TF17 1288 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 AK8Q96MA6 479 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 PNMA2Q9UL42 364 aa5.9□□□□□ -1.46
LINC01541-202ENST00000568095 POLR2AP24928 1970 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 GOLGA6L10A0A0M3HER8 536 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ENO4A6NNW6 628 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 PGRMC1O00264 195 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 BAG3O95817 575 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms