RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CNTN2Q02246 1040 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
TPM1-210ENST00000558264 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 GLYCTKQ8IVS8 523 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 PLEKHO2Q8TD55 490 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 BSNDQ8WZ55 320 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 CEP170P1Q96L14 293 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
TPM1-210ENST00000558264 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
TPM1-210ENST00000558264 DOCK5Q9H7D0 1870 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 ANKRD63C9JTQ0 380 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 F8VZ95 297 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-210ENST00000558264 N4BP1O75113 896 aaKnown RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 TNNT3P45378 269 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 SPATA4Q8NEY3 305 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 CCDC127Q96BQ5 260 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 POP1Q99575 1024 aaKnown RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 LRRC1Q9BTT6 524 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 PDE11AQ9HCR9 933 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 CYP39A1Q9NYL5 469 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 ERLIN1O75477 346 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 ABCB4P21439 1286 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 VGLL4Q14135 290 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 CCDC60Q8IWA6 550 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 C4orf19Q8IY42 314 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 LNX1Q8TBB1 728 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 KAT5Q92993 513 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 TEX13BQ9BXU2 312 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 LUC7LQ9NQ29 371 aaKnown RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 RBM12Q9NTZ6 932 aaKnown RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 SEPT9Q9UHD8 586 aaPredicted RBP11.5□□□□□ -0.57
TPM1-210ENST00000558264 L1RE1Q9UN81 338 aa11.5□□□□□ -0.57
TPM1-210ENST00000558264 UBE4BO95155 1302 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 ADRB2P07550 413 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 KRT13P13646 458 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 KCNA2P16389 499 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 USP8P40818 1118 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 STAT1P42224 750 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 NPTX2P47972 431 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 JAK3P52333 1124 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 KRT76Q01546 638 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 NSUN6Q8TEA1 469 aaKnown RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 MKNK1Q9BUB5 465 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 R3HDMLQ9H3Y0 253 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 DMGDHQ9UI17 866 aaKnown RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 PCDHA10Q9Y5I2 948 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 SOX5P35711 763 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 VAMP7P51809 220 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 SP2Q02086 613 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 EEPD1Q7L9B9 569 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 TOPORSQ9NS56 1045 aaPredicted RBP11.49□□□□□ -0.57
TPM1-210ENST00000558264 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
TPM1-210ENST00000558264 PHIPQ8WWQ0 1821 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 ADGRA3Q8IWK6 1321 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 DENND3A2RUS2 1198 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 FOXN3O00409 490 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 PHACTR2O75167 634 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 USP2O75604 605 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 CASP8Q14790 479 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 NFIL3Q16649 462 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 MTERF2Q49AM1 385 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 C1orf220Q5T0J3 134 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 SEPT14Q6ZU15 432 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 RNF10Q8N5U6 811 aaKnown RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 SLC20A1Q8WUM9 679 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
TPM1-210ENST00000558264 JPH1Q9HDC5 661 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
TPM1-210ENST00000558264 APEX2Q9UBZ4 518 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms