RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DBHP09172 617 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 DNAJA1P31689 397 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ETFBP38117 255 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 KCNJ4P48050 445 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 SCRN1Q12765 414 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 VMACQ2NL98 169 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 SV2CQ496J9 727 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 LRRC24Q50LG9 513 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 FBLN7Q53RD9 439 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 TAF7LQ5H9L4 462 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ZC3H14Q6PJT7 736 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 KRT26Q7Z3Y9 468 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ARHGEF39Q8N4T4 335 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 VGLL2Q8N8G2 317 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 MZB1Q8WU39 189 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ZBED3Q96IU2 234 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 APBA2Q99767 749 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 TINF2Q9BSI4 451 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 API5Q9BZZ5 524 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 MYOZ2Q9NPC6 264 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 PDLIM7Q9NR12 457 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 CNNM1Q9NRU3 951 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 GULP1Q9UBP9 304 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 FBLN5Q9UBX5 448 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 DBR1Q9UK59 544 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ABT1Q9ULW3 272 aaKnown RBP5.18□□□□□ -1.58
VTI1B-203ENST00000554636 RIPOR2Q9Y4F9 1068 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 KIF16BQ96L93 1317 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 ECM29Q5VYK3 1845 aa5.18□□□□□ -1.58
VTI1B-203ENST00000554636 PAPPA2Q9BXP8 1791 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 F8W031 263 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 N4BP3O15049 544 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 TBX1O43435 398 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 DDAH1O94760 285 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 IL1R1P14778 569 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 PAMP19021 973 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 FKBP1AP62942 108 aaKnown RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 TMEM62Q0P6H9 643 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 GRB10Q13322 594 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 UBE4AQ14139 1066 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 NCAPHQ15003 741 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 DEFB115Q30KQ5 88 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF385BQ569K4 471 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 TTLL5Q6EMB2 1281 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 LDHAL6AQ6ZMR3 332 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF804AQ7Z570 1209 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 FAM178BQ8IXR5 827 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 CERS5Q8N5B7 392 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 BVESQ8NE79 360 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 KLHDC4Q8TBB5 520 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 MICAL1Q8TDZ2 1067 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 RCC1LQ96I51 464 aaKnown RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 CAPNS2Q96L46 248 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 BCAS3Q9H6U6 928 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 ZNF408Q9H9D4 720 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 LRP2BPQ9P2M1 347 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 TNNQ9UQP3 1299 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 COL1A1P02452 1464 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 AOX1Q06278 1338 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 ZBED9Q6R2W3 1325 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 FAM205AQ6ZU69 1335 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 MROH5Q6ZUA9 1318 aa5.17□□□□□ -1.58
VTI1B-203ENST00000554636 WDR33Q9C0J8 1336 aaKnown RBP5.17□□□□□ -1.58
VTI1B-203ENST00000554636 EYA2O00167 538 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 NOP56O00567 594 aaKnown RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 WNT10BO00744 389 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 FOXN1O15353 648 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 PLIN1O60240 522 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 BCAR3O75815 825 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 SASH1O94885 1247 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 UBTFL1P0CB47 393 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 NAT2P11245 290 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 PLS3P13797 630 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 TRIM27P14373 513 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 FGFR2P21802 821 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 ECE1P42892 770 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 GYG1P46976 350 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 LIMS1P48059 325 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 MAPKAPK2P49137 400 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 TNNI3KQ59H18 835 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 METTL24Q5JXM2 366 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 GTF2IRD2BQ6EKJ0 949 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 PAQR3Q6TCH7 311 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 ATG9AQ7Z3C6 839 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 GTF2IRD2Q86UP8 949 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 IGDCC3Q8IVU1 814 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 LZTR1Q8N653 840 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 TDRD7Q8NHU6 1098 aaKnown RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 USP33Q8TEY7 942 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 BTN2A2Q8WVV5 523 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 ARHGAP45Q92619 1136 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 DCPSQ96C86 337 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms