RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 PDIA5Q14554 519 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 EMC10Q5UCC4 262 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 MYBP10242 640 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 CASP4P49662 377 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 ZYXQ15942 572 aaKnown RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 SUPT20HQ8NEM7 779 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 HAS1Q92839 578 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■■■ 56.5
HDAC7-230ENST00000552960 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 ZNF70Q9UC06 446 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 AJAP1Q9UKB5 411 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-230ENST00000552960 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
HDAC7-230ENST00000552960 CCDC188H7C350 402 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 PON1P27169 355 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 GALCP54803 685 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 BYSLQ13895 437 aaKnown RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 ACCSLQ4AC99 568 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 AGBL2Q5U5Z8 902 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 LRRC57Q8N9N7 239 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 PRMT1Q99873 361 aaKnown RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 EDIL3O43854 480 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DRD4P21917 467 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DR1Q01658 176 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 LRRC14Q15048 493 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 TMEM119Q4V9L6 283 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DENND2CQ68D51 928 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
HDAC7-230ENST00000552960 SAMD15Q9P1V8 674 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
HDAC7-230ENST00000552960 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CDC25CP30307 473 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 DGKZQ13574 1117 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 OTUD6AQ7L8S5 288 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 LRRC34Q8IZ02 419 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 SLC16A10Q8TF71 515 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 GLIS2Q9BZE0 524 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 FAM114A2Q9NRY5 505 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 ZNRF3Q9ULT6 936 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 TATDN1Q6P1N9 297 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 SFR1Q86XK3 245 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 TACO1Q9BSH4 297 aaKnown RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 MRIQ9BWK5 157 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 NOD2Q9HC29 1040 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CCT8L1PA6NM43 557 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 DDX3XO00571 662 aaKnown RBP eCLIP13.37□□□□□ -0.275e-7■■■■□ 21.2
HDAC7-230ENST00000552960 GCNT3O95395 438 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CYP11B2P19099 503 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 PSMC6P62333 389 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 ICA1Q05084 483 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 KCNA1Q09470 495 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 SLC29A2Q14542 456 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 ABCB5Q2M3G0 1257 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 NT5DC3Q86UY8 548 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 HOOK3Q86VS8 718 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CCDC50Q8IVM0 306 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms